RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 ACTL7AQ9Y615 435 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 EPN1Q9Y6I3 576 aaPredicted RBP16.58■□□□□ 0.24
SRM-204ENST00000475189 PI4KAP42356 2102 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 FRYLO94915 3013 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 TMEM110-MUSTN1A8MSY1 372 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 RASA4BC9J798 803 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 RASA4O43374 803 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 KDELR3O43731 214 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 RNASEH1O60930 286 aaKnown RBP16.57■□□□□ 0.24
SRM-204ENST00000475189 NDUFA10O95299 355 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 DNTTP04053 509 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 CD6P30203 668 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 ARHGAP25P42331 645 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 SERPINH1P50454 418 aaKnown RBP16.57■□□□□ 0.24
SRM-204ENST00000475189 CLCN6P51797 869 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 TAS2R40P59535 323 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 ELAVL3Q14576 367 aaKnown RBP16.57■□□□□ 0.24
SRM-204ENST00000475189 CST6Q15828 149 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 ATP13A4Q4VNC1 1196 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 RAD9BQ6WBX8 426 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 Q6ZVU0 165 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 LPCAT2Q7L5N7 544 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 TMEM139Q8IV31 216 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 MMAAQ8IVH4 418 aaKnown RBP16.57■□□□□ 0.24
SRM-204ENST00000475189 HMCESQ96FZ2 354 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 TOE1Q96GM8 510 aaKnown RBP16.57■□□□□ 0.24
SRM-204ENST00000475189 HINFPQ9BQA5 517 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 LRRC19Q9H756 370 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 PCDH18Q9HCL0 1135 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 DONSONQ9NYP3 566 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 HPCAL4Q9UM19 191 aa16.57■□□□□ 0.24
SRM-204ENST00000475189 H3BRJ5 948 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 MID1O15344 667 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 ZNF821O75541 412 aaPredicted RBP16.56■□□□□ 0.24
SRM-204ENST00000475189 OXTRP30559 389 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 ARL4AP40617 200 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 ARSEP51690 589 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 NDST2P52849 883 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 RPL6Q02878 288 aaKnown RBP16.56■□□□□ 0.24
SRM-204ENST00000475189 SERINC3Q13530 473 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 SPA17Q15506 151 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 PARP15Q460N3 678 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 SPDYCQ5MJ68 293 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 C22orf39Q6P5X5 142 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 DEFB119Q8N690 84 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 FAM71BQ8TC56 605 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 OR8D1Q8WZ84 308 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 TSC1Q92574 1164 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 CELF6Q96J87 481 aaKnown RBP16.56■□□□□ 0.24
SRM-204ENST00000475189 ARRDC1-AS1Q9H2J1 176 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 PABPC3Q9H361 631 aaKnown RBP16.56■□□□□ 0.24
SRM-204ENST00000475189 SCML1Q9UN30 329 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 TFR2Q9UP52 801 aa16.56■□□□□ 0.24
SRM-204ENST00000475189 MCF2LO15068 1137 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 ALOX15BO15296 676 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 BNIP3LO60238 219 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 NDUFS2O75306 463 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 TGM1P22735 817 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 AMPD1P23109 780 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 IL4RP24394 825 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 SLC8A1P32418 973 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 GJC1P36383 396 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 PTGER3P43115 390 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 PSMD8P48556 350 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 DHPSP49366 369 aaPredicted RBP16.55■□□□□ 0.24
SRM-204ENST00000475189 CDH6P55285 790 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 SPEM2Q0P670 501 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 TTC31Q49AM3 519 aaPredicted RBP16.55■□□□□ 0.24
SRM-204ENST00000475189 AFMIDQ63HM1 303 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 LEKR1Q6ZMV7 388 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 FAM124AQ86V42 546 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 ZNF354CQ86Y25 554 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 ARHGAP12Q8IWW6 846 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 OR2A12Q8NGT7 310 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 CSPG4P5Q96PW8 444 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 BAG1Q99933 345 aaPredicted RBP16.55■□□□□ 0.24
SRM-204ENST00000475189 CEP44Q9C0F1 390 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 SLC39A8Q9C0K1 460 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 TNKS2Q9H2K2 1166 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 PARD6AQ9NPB6 346 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 ETNK2Q9NVF9 386 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 SARDHQ9UL12 918 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 FCF1Q9Y324 198 aaKnown RBP16.55■□□□□ 0.24
SRM-204ENST00000475189 REXO2Q9Y3B8 237 aaKnown RBP16.55■□□□□ 0.24
SRM-204ENST00000475189 PCDHGA5Q9Y5G8 931 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 SHROOM3Q8TF72 1996 aa16.55■□□□□ 0.24
SRM-204ENST00000475189 BCLAF3A2AJT9 711 aaKnown RBP16.54■□□□□ 0.24
SRM-204ENST00000475189 ZSCAN5CA6NGD5 496 aaPredicted RBP16.54■□□□□ 0.24
SRM-204ENST00000475189 LRP3O75074 770 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 ADH1BP00325 375 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 IL1BP01584 269 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 CD48P09326 243 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 HADHBP55084 474 aaKnown RBP16.54■□□□□ 0.24
SRM-204ENST00000475189 GEMIN4P57678 1058 aaKnown RBP16.54■□□□□ 0.24
SRM-204ENST00000475189 CREB5Q02930 508 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 KRT81Q14533 505 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 USP30Q70CQ3 517 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 ARMCX6Q7L4S7 300 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 SLC41A1Q8IVJ1 513 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 AADATQ8N5Z0 425 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms