RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 C22orf39Q6P5X5 142 aa24.57■■□□□ 1.52
CPNE1-223ENST00000475146 AADATQ8N5Z0 425 aa24.57■■□□□ 1.52
CPNE1-223ENST00000475146 FNIP1Q8TF40 1166 aa24.57■■□□□ 1.52
CPNE1-223ENST00000475146 NEUROG2Q9H2A3 272 aa24.57■■□□□ 1.52
CPNE1-223ENST00000475146 GPATCH2LQ9NWQ4 482 aa24.57■■□□□ 1.52
CPNE1-223ENST00000475146 EIF2B4Q9UI10 523 aaKnown RBP24.57■■□□□ 1.52
CPNE1-223ENST00000475146 FZD4Q9ULV1 537 aa24.57■■□□□ 1.52
CPNE1-223ENST00000475146 FARP1Q9Y4F1 1045 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-223ENST00000475146 PI4KAP42356 2102 aa24.56■■□□□ 1.52
CPNE1-223ENST00000475146 A0A087X0T9 212 aa24.56■■□□□ 1.52
CPNE1-223ENST00000475146 C1QTNF3-AMACRE9PGA6 284 aa24.56■■□□□ 1.52
CPNE1-223ENST00000475146 ALOX15BO15296 676 aa24.56■■□□□ 1.52
CPNE1-223ENST00000475146 SMAD6O43541 496 aaKnown RBP24.56■■□□□ 1.52
CPNE1-223ENST00000475146 RAMP2O60895 175 aa24.56■■□□□ 1.52
CPNE1-223ENST00000475146 FAM228BP0C875 321 aa24.56■■□□□ 1.52
CPNE1-223ENST00000475146 KCNA4P22459 653 aa24.56■■□□□ 1.52
CPNE1-223ENST00000475146 FAM46CQ5VWP2 391 aa24.56■■□□□ 1.52
CPNE1-223ENST00000475146 GTPBP2Q9BX10 602 aaKnown RBP24.56■■□□□ 1.52
CPNE1-223ENST00000475146 CAPN10Q9HC96 672 aa24.56■■□□□ 1.52
CPNE1-223ENST00000475146 PCSK1NQ9UHG2 260 aa24.56■■□□□ 1.52
CPNE1-223ENST00000475146 AP4E1Q9UPM8 1137 aa24.56■■□□□ 1.52
CPNE1-223ENST00000475146 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-223ENST00000475146 A0A1B0GTW7 788 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 MCF2LO15068 1137 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 ZMPSTE24O75844 475 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 GOT1P17174 413 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 RECQLP46063 649 aaPredicted RBP24.55■■□□□ 1.52
CPNE1-223ENST00000475146 SERPINH1P50454 418 aaKnown RBP24.55■■□□□ 1.52
CPNE1-223ENST00000475146 TPI1P60174 286 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 ARF5P84085 180 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 UAP1L1Q3KQV9 507 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 POM121L1PQ3SYA9 428 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 DAB2IPQ5VWQ8 1189 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 ZNF354CQ86Y25 554 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 RTL3Q8N8U3 475 aaKnown RBP24.55■■□□□ 1.52
CPNE1-223ENST00000475146 ARHGEF2Q92974 986 aaKnown RBP24.55■■□□□ 1.52
CPNE1-223ENST00000475146 ACE2Q9BYF1 805 aaPredicted RBP24.55■■□□□ 1.52
CPNE1-223ENST00000475146 THAP2Q9H0W7 228 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 MAGEH1Q9H213 219 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 TNKS2Q9H2K2 1166 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 DHX35Q9H5Z1 703 aaKnown RBP24.55■■□□□ 1.52
CPNE1-223ENST00000475146 CATSPERBQ9H7T0 1116 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 ARHGAP20Q9P2F6 1191 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 SARDHQ9UL12 918 aa24.55■■□□□ 1.52
CPNE1-223ENST00000475146 LRRC72A6NJI9 287 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 CDX4O14627 284 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-223ENST00000475146 BCAT2O15382 392 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-223ENST00000475146 PRPSAP2O60256 369 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 TPM1P09493 284 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 METAP1P53582 386 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 GALCP54803 685 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 SLC20A2Q08357 652 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 POLD3Q15054 466 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-223ENST00000475146 CCDC122Q5T0U0 273 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 KIAA0895LQ68EN5 471 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 ALKBH5Q6P6C2 394 aaKnown RBP24.54■■□□□ 1.52
CPNE1-223ENST00000475146 NCEH1Q6PIU2 408 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 VSTM4Q8IW00 320 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 PIP4K2CQ8TBX8 421 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 BIRC7Q96CA5 298 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 PEBP4Q96S96 227 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 SNRNP25Q9BV90 132 aaKnown RBP24.54■■□□□ 1.52
CPNE1-223ENST00000475146 PPM1HQ9ULR3 514 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 HPCAL4Q9UM19 191 aa24.54■■□□□ 1.52
CPNE1-223ENST00000475146 PLK4O00444 970 aa24.53■■□□□ 1.52
CPNE1-223ENST00000475146 SYPP08247 313 aa24.53■■□□□ 1.52
CPNE1-223ENST00000475146 MIPP30301 263 aa24.53■■□□□ 1.52
CPNE1-223ENST00000475146 SEMA3BQ13214 749 aa24.53■■□□□ 1.52
CPNE1-223ENST00000475146 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.53■■□□□ 1.52
CPNE1-223ENST00000475146 ARFGAP1Q8N6T3 406 aa24.53■■□□□ 1.52
CPNE1-223ENST00000475146 OR2A12Q8NGT7 310 aa24.53■■□□□ 1.52
CPNE1-223ENST00000475146 OR2T34Q8NGX1 318 aa24.53■■□□□ 1.52
CPNE1-223ENST00000475146 OR14C36Q8NHC7 312 aa24.53■■□□□ 1.52
CPNE1-223ENST00000475146 CEP44Q9C0F1 390 aa24.53■■□□□ 1.52
CPNE1-223ENST00000475146 FCF1Q9Y324 198 aaKnown RBP24.53■■□□□ 1.52
CPNE1-223ENST00000475146 ACTL7AQ9Y615 435 aa24.53■■□□□ 1.52
CPNE1-223ENST00000475146 ARHGAP33O14559 1287 aa24.52■■□□□ 1.52
CPNE1-223ENST00000475146 FGF10O15520 208 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-223ENST00000475146 HNRNPH3P31942 346 aaKnown RBP24.52■■□□□ 1.52
CPNE1-223ENST00000475146 CHRNA3P32297 505 aa24.52■■□□□ 1.52
CPNE1-223ENST00000475146 DRD3P35462 400 aa24.52■■□□□ 1.52
CPNE1-223ENST00000475146 EIF4A3P38919 411 aaKnown RBP24.52■■□□□ 1.52
CPNE1-223ENST00000475146 DNA2P51530 1060 aa24.52■■□□□ 1.52
CPNE1-223ENST00000475146 ADPRHP54922 357 aa24.52■■□□□ 1.52
CPNE1-223ENST00000475146 CA9Q16790 459 aa24.52■■□□□ 1.52
CPNE1-223ENST00000475146 ERMARDQ5T6L9 678 aa24.52■■□□□ 1.52
CPNE1-223ENST00000475146 CHST14Q8NCH0 376 aa24.52■■□□□ 1.52
CPNE1-223ENST00000475146 OR8K1Q8NGG5 319 aa24.52■■□□□ 1.52
CPNE1-223ENST00000475146 GRIN3AQ8TCU5 1115 aa24.52■■□□□ 1.52
CPNE1-223ENST00000475146 ZNHIT6Q9NWK9 470 aaKnown RBP24.52■■□□□ 1.52
CPNE1-223ENST00000475146 EIF3CLB5ME19 914 aaKnown RBP24.51■■□□□ 1.51
CPNE1-223ENST00000475146 EEF2KO00418 725 aaKnown RBP24.51■■□□□ 1.51
CPNE1-223ENST00000475146 LRCH4O75427 683 aa24.51■■□□□ 1.51
CPNE1-223ENST00000475146 CTSLP07711 333 aa24.51■■□□□ 1.51
CPNE1-223ENST00000475146 HTR7P34969 479 aa24.51■■□□□ 1.51
CPNE1-223ENST00000475146 GEMIN4P57678 1058 aaKnown RBP24.51■■□□□ 1.51
CPNE1-223ENST00000475146 TSR1Q2NL82 804 aaKnown RBP24.51■■□□□ 1.51
CPNE1-223ENST00000475146 PPM1JQ5JR12 505 aa24.51■■□□□ 1.51
CPNE1-223ENST00000475146 LEKR1Q6ZMV7 388 aa24.51■■□□□ 1.51
CPNE1-223ENST00000475146 PCDH20Q8N6Y1 951 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms