RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 DRICH1Q6PGQ1 229 aaPredicted RBP9.73□□□□□ -0.85
DDX39B-217ENST00000474961 DARS2Q6PI48 645 aaKnown RBP9.73□□□□□ -0.85
DDX39B-217ENST00000474961 CCDC137Q6PK04 289 aaKnown RBP9.73□□□□□ -0.85
DDX39B-217ENST00000474961 ZNF783Q6ZMS7 281 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 ARHGAP36Q6ZRI8 547 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 LRRC49Q8IUZ0 686 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 ATPAF2Q8N5M1 289 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 NAT16Q8N8M0 369 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 CCNYQ8ND76 341 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 ATL2Q8NHH9 583 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 TTC8Q8TAM2 541 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 TFB1MQ8WVM0 346 aaKnown RBP9.73□□□□□ -0.85
DDX39B-217ENST00000474961 ARHGEF2Q92974 986 aaKnown RBP9.73□□□□□ -0.85
DDX39B-217ENST00000474961 HDAC11Q96DB2 347 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 LMLNQ96KR4 655 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 TSGA13Q96PP4 275 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 QKIQ96PU8 341 aaKnown RBP eCLIP9.73□□□□□ -0.85
DDX39B-217ENST00000474961 XPO6Q96QU8 1125 aaKnown RBP9.73□□□□□ -0.85
DDX39B-217ENST00000474961 LGMNQ99538 433 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 SPON2Q9BUD6 331 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 SLC2A11Q9BYW1 496 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 BRD8Q9H0E9 1235 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 BRD9Q9H8M2 597 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 KCNK12Q9HB15 430 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 IGSF9Q9P2J2 1179 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 THEGQ9P2T0 379 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 ZNF148Q9UQR1 794 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 COL4A2P08572 1712 aa9.73□□□□□ -0.85
DDX39B-217ENST00000474961 BCLAF3A2AJT9 711 aaKnown RBP9.72□□□□□ -0.85
DDX39B-217ENST00000474961 LOC730098B7Z3J9 87 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 ARNTLO00327 626 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 CACNG3O60359 315 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 ITGAVP06756 1048 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 ASGR2P07307 311 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 CISD3P0C7P0 127 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 VAV1P15498 845 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 CCNCP24863 283 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 RBL1P28749 1068 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 HLA-FP30511 346 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 CD70P32970 193 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 CSKP41240 450 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 FNTAP49354 379 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 NUMBP49757 651 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 OXCT1P55809 520 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 PPIDQ08752 370 aaKnown RBP9.72□□□□□ -0.85
DDX39B-217ENST00000474961 AP1B1Q10567 949 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 SERINC3Q13530 473 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 SLC12A1Q13621 1099 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 PRKD1Q15139 912 aaPredicted RBP9.72□□□□□ -0.85
DDX39B-217ENST00000474961 ITPRIPL2Q3MIP1 535 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 SLC45A4Q5BKX6 768 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 IL31Q6EBC2 164 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 C12orf40Q86WS4 652 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 ZNF354CQ86Y25 554 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 CDKL3Q8IVW4 592 aaPredicted RBP9.72□□□□□ -0.85
DDX39B-217ENST00000474961 CCDC105Q8IYK2 499 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 SLC44A3Q8N4M1 653 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 MMGT1Q8N4V1 131 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 ZNF557Q8N988 423 aaPredicted RBP9.72□□□□□ -0.85
DDX39B-217ENST00000474961 NOA1Q8NC60 698 aaKnown RBP9.72□□□□□ -0.85
DDX39B-217ENST00000474961 CSGALNACT1Q8TDX6 532 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 ALG14Q96F25 216 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 CCDC114Q96M63 670 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 FEM1AQ9BSK4 669 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 TMEM121Q9BTD3 319 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 ACE2Q9BYF1 805 aaPredicted RBP9.72□□□□□ -0.85
DDX39B-217ENST00000474961 MUC3BQ9H195 1237 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 USP29Q9HBJ7 922 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 ABCB8Q9NUT2 735 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 DNAJC17Q9NVM6 304 aaKnown RBP9.72□□□□□ -0.85
DDX39B-217ENST00000474961 GTSE1Q9NYZ3 720 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 PCYOX1Q9UHG3 505 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 IPO11Q9UI26 975 aaKnown RBP9.72□□□□□ -0.85
DDX39B-217ENST00000474961 GGA2Q9UJY4 613 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 FBXO10Q9UK96 956 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 CDV3Q9UKY7 258 aaKnown RBP9.72□□□□□ -0.85
DDX39B-217ENST00000474961 OR51B4Q9Y5P0 310 aa9.72□□□□□ -0.85
DDX39B-217ENST00000474961 CFAP69A5D8W1 941 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 J3KR12 359 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 TRIM24O15164 1050 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 KCNN4O15554 427 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 KDELR3O43731 214 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 SNAP91O60641 907 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 MAFKO60675 156 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 PRAMEF11O60813 436 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 TULP3O75386 442 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 PABPC1P11940 636 aaKnown RBP9.71□□□□□ -0.86
DDX39B-217ENST00000474961 GLDCP23378 1020 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 GJA4P35212 333 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 ETFBP38117 255 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 PTGIRP43119 386 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 SLC6A11P48066 632 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 DGKGP49619 791 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 PLK1P53350 603 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 MRPS25P82663 173 aaKnown RBP9.71□□□□□ -0.86
DDX39B-217ENST00000474961 LMNB2Q03252 620 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 ZNF33AQ06730 810 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 IL10RBQ08334 325 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 PITRM1Q5JRX3 1037 aa9.71□□□□□ -0.86
DDX39B-217ENST00000474961 HEATR6Q6AI08 1181 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms