RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 EMC1Q8N766 993 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 C1orf216Q8TAB5 229 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 PTPRN2Q92932 1015 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 CFAP57Q96MR6 1250 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 FAM129BQ96TA1 746 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 TBCBQ99426 244 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 FEM1AQ9BSK4 669 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 PIGVQ9NUD9 493 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 FTSJ1Q9UET6 329 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 ADAMTS1Q9UHI8 967 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 WASF3Q9UPY6 502 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 SLCO1B1Q9Y6L6 691 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 USP24Q9UPU5 2620 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 SRGAP2O75044 1071 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 ADCY5O95622 1261 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 SERPING1P05155 500 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 IGHV4-34P06331 123 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 ITGAVP06756 1048 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 VAV1P15498 845 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 CCR5P51681 352 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 ATP11AP98196 1134 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 BNC1Q01954 994 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 DLG2Q15700 870 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 CDO1Q16878 200 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 C6orf118Q5T5N4 469 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 CXorf57Q6NSI4 855 aaKnown RBP15.5■□□□□ 0.07
VARS-223ENST00000474643 DCUN1D2Q6PH85 259 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 Q6ZVU0 165 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 MON1BQ7L1V2 547 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 RAB44Q7Z6P3 723 aaPredicted RBP15.5■□□□□ 0.07
VARS-223ENST00000474643 TFAP2DQ7Z6R9 452 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 AADATQ8N5Z0 425 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 KDF1Q8NAX2 398 aaPredicted RBP15.5■□□□□ 0.07
VARS-223ENST00000474643 RXFP2Q8WXD0 754 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 ADAMTS14Q8WXS8 1223 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 SYN2Q92777 582 aaPredicted RBP15.5■□□□□ 0.07
VARS-223ENST00000474643 GATA6Q92908 595 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 NPY6RQ99463 290 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 GRPEL1Q9HAV7 217 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 ZNHIT6Q9NWK9 470 aaKnown RBP15.5■□□□□ 0.07
VARS-223ENST00000474643 TMEM59LQ9UK28 342 aa15.5■□□□□ 0.07
VARS-223ENST00000474643 NUMA1Q14980 2115 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 H0Y8X5 98 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 KPNA3O00505 521 aaPredicted RBP15.49■□□□□ 0.07
VARS-223ENST00000474643 VILLO15195 856 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 MAGEC1O60732 1142 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 GJB6O95452 261 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 TFE3P19532 575 aaPredicted RBP15.49■□□□□ 0.07
VARS-223ENST00000474643 CDC25BP30305 580 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 OR1E1P30953 314 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 MAT2AP31153 395 aaKnown RBP15.49■□□□□ 0.07
VARS-223ENST00000474643 CTSKP43235 329 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 ARRB1P49407 418 aaPredicted RBP15.49■□□□□ 0.07
VARS-223ENST00000474643 PLK1P53350 603 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 PTP4A2Q12974 167 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 ARL13BQ3SXY8 428 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 VSTM4Q8IW00 320 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 MCOLN2Q8IZK6 566 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 C3orf20Q8ND61 904 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 JOSD2Q8TAC2 188 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 SPON2Q9BUD6 331 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 TAS2R14Q9NYV8 317 aa15.49■□□□□ 0.07
VARS-223ENST00000474643 DDX3XO00571 662 aaKnown RBP eCLIP15.48■□□□□ 0.07
VARS-223ENST00000474643 ALOX15BO15296 676 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 YKT6O15498 198 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 SLC7A4O43246 635 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 ATP9BO43861 1147 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 RTN2O75298 545 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 FTLP02792 175 aaPredicted RBP15.48■□□□□ 0.07
VARS-223ENST00000474643 C7P10643 843 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 GPD1P21695 349 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 CXCR3P49682 368 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 IRAK1P51617 712 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 EIF4EBP2Q13542 120 aaPredicted RBP15.48■□□□□ 0.07
VARS-223ENST00000474643 STAT4Q14765 748 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 SETMARQ53H47 684 aaPredicted RBP15.48■□□□□ 0.07
VARS-223ENST00000474643 ARCQ7LC44 396 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 TMC6Q7Z403 805 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 C14orf80Q86SX3 495 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 GLRX5Q86SX6 157 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 OXR1Q8N573 874 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 SH2D3CQ8N5H7 860 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 PIP4K2CQ8TBX8 421 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 MCEEQ96PE7 176 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 ELF4Q99607 663 aaPredicted RBP15.48■□□□□ 0.07
VARS-223ENST00000474643 DEF6Q9H4E7 631 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 ARHGEF38Q9NXL2 777 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 ZFHX4Q86UP3 3567 aa15.48■□□□□ 0.07
VARS-223ENST00000474643 PCNX2A6NKB5 2137 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 SIGLEC16A6NMB1 481 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 E9PAM4 449 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 CBX4O00257 560 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 TNFSF14O43557 240 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 CBFA2T3O75081 653 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 CNTN5O94779 1100 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 GZMAP12544 262 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 RRM1P23921 792 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 RFC1P35251 1148 aaPredicted RBP15.47■□□□□ 0.07
VARS-223ENST00000474643 NUDT1P36639 197 aa15.47■□□□□ 0.07
VARS-223ENST00000474643 DNA2P51530 1060 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms