RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 TLR6Q9Y2C9 796 aa13.62□□□□□ -0.23
RTN4R-206ENST00000474642 FARP1Q9Y4F1 1045 aaPredicted RBP13.62□□□□□ -0.23
RTN4R-206ENST00000474642 PCDHGA7Q9Y5G6 932 aa13.62□□□□□ -0.23
RTN4R-206ENST00000474642 HS3ST3A1Q9Y663 406 aa13.62□□□□□ -0.23
RTN4R-206ENST00000474642 KPNA3O00505 521 aaPredicted RBP13.61□□□□□ -0.23
RTN4R-206ENST00000474642 TPP1O14773 563 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 ATP9BO43861 1147 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 NOBOXO60393 691 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 CUTAO60888 179 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 APOEP02649 317 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 TACR2P21452 398 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 SYT1P21579 422 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 NR2F2P24468 414 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 GTF2H1P32780 548 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 OXCT1P55809 520 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 NNTQ13423 1086 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 MANEAQ5SRI9 462 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 PARGQ86W56 976 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 FBXL13Q8NEE6 735 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 DQX1Q8TE96 717 aaKnown RBP13.61□□□□□ -0.23
RTN4R-206ENST00000474642 PPP1R9BQ96SB3 815 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 ZSCAN16Q9H4T2 348 aaPredicted RBP13.61□□□□□ -0.23
RTN4R-206ENST00000474642 EPB41L5Q9HCM4 733 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 RAB20Q9NX57 234 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 XPO7Q9UIA9 1087 aaKnown RBP13.61□□□□□ -0.23
RTN4R-206ENST00000474642 ZFR2Q9UPR6 939 aaKnown RBP13.61□□□□□ -0.23
RTN4R-206ENST00000474642 PAXBP1Q9Y5B6 917 aa13.61□□□□□ -0.23
RTN4R-206ENST00000474642 SPTY2D1-AS1A0A0U1RR47 76 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 F5H5T6 163 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 O00370 1275 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 CASC3O15234 703 aaKnown RBP13.6□□□□□ -0.23
RTN4R-206ENST00000474642 KLRC4O43908 158 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 LIPCP11150 499 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 VDRP11473 427 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 JUNDP17535 347 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 UGT1A5P35504 534 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 PSMC2P35998 433 aaKnown RBP13.6□□□□□ -0.23
RTN4R-206ENST00000474642 VASPP50552 380 aaPredicted RBP13.6□□□□□ -0.23
RTN4R-206ENST00000474642 PDX1P52945 283 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 PLK1P53350 603 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 YWHAEP62258 255 aaKnown RBP13.6□□□□□ -0.23
RTN4R-206ENST00000474642 ENPEPQ07075 957 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 EIF3IQ13347 325 aaKnown RBP13.6□□□□□ -0.23
RTN4R-206ENST00000474642 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
RTN4R-206ENST00000474642 SEL1L3Q68CR1 1132 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 PMF1Q6P1K2 205 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 RAB11FIP2Q7L804 512 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 CIR1Q86X95 450 aaPredicted RBP13.6□□□□□ -0.23
RTN4R-206ENST00000474642 PTRH1Q86Y79 214 aaKnown RBP13.6□□□□□ -0.23
RTN4R-206ENST00000474642 CEP57L1Q8IYX8 460 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 CCAR2Q8N163 923 aaKnown RBP13.6□□□□□ -0.23
RTN4R-206ENST00000474642 CLEC4CQ8WTT0 213 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 SLC39A13Q96H72 371 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 BMFQ96LC9 184 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 CCDC3Q9BQI4 270 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 STRADBQ9C0K7 418 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 GEMIN8Q9NWZ8 242 aaKnown RBP13.6□□□□□ -0.23
RTN4R-206ENST00000474642 FAM13BQ9NYF5 915 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 TRAF3IP3Q9Y228 551 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 PCDHGA4Q9Y5G9 962 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 UNC13CQ8NB66 2214 aa13.6□□□□□ -0.23
RTN4R-206ENST00000474642 BSNQ9UPA5 3926 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 ICE1Q9Y2F5 2266 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 POM121BA6NF01 834 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 TMX2-CTNND1H3BSU7 103 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 GABBR2O75899 941 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 FBXO21O94952 628 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 CTSLP07711 333 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 HSP90AA1P07900 732 aaKnown RBP13.59□□□□□ -0.23
RTN4R-206ENST00000474642 CHRNA3P32297 505 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 RABIFP47224 123 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 MXI1P50539 228 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 KYAT3Q6YP21 454 aaKnown RBP13.59□□□□□ -0.23
RTN4R-206ENST00000474642 VASH2Q86V25 355 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 SLC35F5Q8WV83 523 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 FAM149B1Q96BN6 582 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 EEF2KMTQ96G04 330 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 BTN2A3PQ96KV6 586 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 CCDC114Q96M63 670 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 BOCQ9BWV1 1114 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 SRRTQ9BXP5 876 aaKnown RBP13.59□□□□□ -0.23
RTN4R-206ENST00000474642 MIS12Q9H081 205 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 SPASTQ9UBP0 616 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 KLF15Q9UIH9 416 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 ACSL6Q9UKU0 697 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 NAALADL1Q9UQQ1 740 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 MAN2B2Q9Y2E5 1009 aa13.59□□□□□ -0.23
RTN4R-206ENST00000474642 TCAF2A6NFQ2 919 aa13.58□□□□□ -0.24
RTN4R-206ENST00000474642 PAK4O96013 591 aaPredicted RBP13.58□□□□□ -0.24
RTN4R-206ENST00000474642 JMJD7P0C870 316 aa13.58□□□□□ -0.24
RTN4R-206ENST00000474642 HGFP14210 728 aa13.58□□□□□ -0.24
RTN4R-206ENST00000474642 RPL13P26373 211 aaKnown RBP13.58□□□□□ -0.24
RTN4R-206ENST00000474642 CYP4F2P78329 520 aa13.58□□□□□ -0.24
RTN4R-206ENST00000474642 CUL2Q13617 745 aa13.58□□□□□ -0.24
RTN4R-206ENST00000474642 PDE1CQ14123 709 aaPredicted RBP13.58□□□□□ -0.24
RTN4R-206ENST00000474642 CLCA4Q14CN2 919 aa13.58□□□□□ -0.24
RTN4R-206ENST00000474642 IGFBP7Q16270 282 aa13.58□□□□□ -0.24
RTN4R-206ENST00000474642 SKIDA1Q1XH10 827 aa13.58□□□□□ -0.24
RTN4R-206ENST00000474642 ZC3H12AQ5D1E8 599 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms