RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 DKK1O94907 266 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 ENDOD1O94919 500 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 MT-CO1P00395 513 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 PRNPP04156 253 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 WNT1P04628 370 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 ATXN1LP0C7T5 689 aaKnown RBP20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 RECQLP46063 649 aaPredicted RBP20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 METAP1P53582 386 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 PPP2CBP62714 309 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 PPP2CAP67775 309 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 FMO1Q01740 532 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 SLC20A2Q08357 652 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 OVGP1Q12889 678 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 SETMARQ53H47 684 aaPredicted RBP20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 TRNP1Q6NT89 227 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 RETSATQ6NUM9 610 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 CCNI2Q6ZMN8 369 aaPredicted RBP20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 IQCHQ86VS3 1027 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 FAM131BQ86XD5 332 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 MFSD2AQ8NA29 543 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 TMIEQ8NEW7 156 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 GPT2Q8TD30 523 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 RETREG1Q9H6L5 497 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 ERVMER34-1Q9H9K5 563 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 NLRC4Q9NPP4 1024 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 DYRK4Q9NR20 520 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 TOR4AQ9NXH8 423 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 FTSJ1Q9UET6 329 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 CHD6Q8TD26 2715 aa20.84■□□□□ 0.93
PDLIM4-206ENST00000474421 A0A0D9SEW6 157 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 FAM170AA1A519 330 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 PLK4O00444 970 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 SDC4P31431 198 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 CHRNA3P32297 505 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 KLK7P49862 253 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 ATP11AP98196 1134 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 IL9RQ01113 521 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 MYL5Q02045 173 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 STX1AQ16623 288 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 POM121L1PQ3SYA9 428 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 NEK5Q6P3R8 708 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 OR2A12Q8NGT7 310 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 PCMTD1Q96MG8 357 aaPredicted RBP20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 TMPRSS4Q9NRS4 437 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 ARHGAP20Q9P2F6 1191 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 SIK3Q9Y2K2 1263 aa20.83■□□□□ 0.93
PDLIM4-206ENST00000474421 ZZEF1O43149 2961 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 KPNA3O00505 521 aaPredicted RBP20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 RNGTTO60942 597 aaKnown RBP20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 ITGAVP06756 1048 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 CHRNB2P17787 502 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 RRM1P23921 792 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 ETFBP38117 255 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 NSFP46459 744 aaKnown RBP20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 COPB1P53618 953 aaKnown RBP20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 NXPH1P58417 271 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 NRG1Q02297 640 aaPredicted RBP20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 STAT4Q14765 748 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 TMPRSS7Q7RTY8 843 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 GALNT15Q8N3T1 639 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 EMC1Q8N766 993 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 NEK11Q8NG66 645 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 RXFP2Q8WXD0 754 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 C11orf70Q9BRQ4 267 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 SPON2Q9BUD6 331 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 CEP44Q9C0F1 390 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 LIMA1Q9UHB6 759 aaKnown RBP20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 COL5A1P20908 1838 aaPredicted RBP20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 DMXL2Q8TDJ6 3036 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 PLXNB3Q9ULL4 1909 aa20.82■□□□□ 0.92
PDLIM4-206ENST00000474421 ZFHX4Q86UP3 3567 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 DOCK9Q9BZ29 2069 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 CXorf51AA0A1B0GTR3 108 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 GOLGA8CPA6NN73 597 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 SRRM3A6NNA2 597 aaPredicted RBP20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 LGALS16A8MUM7 142 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 PRAMEF26H0Y7S4 382 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 K7ERQ8 282 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 CBX4O00257 560 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 WNT9AO14904 365 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 MAT2AP31153 395 aaKnown RBP20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 ADRA1BP35368 520 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 PTPN9P43378 593 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 GNA12Q03113 381 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 SYCP1Q15431 976 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 PIP5KL1Q5T9C9 394 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 C22orf39Q6P5X5 142 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 LINGO4Q6UY18 593 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 STRADAQ7RTN6 431 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 OR7D4Q8NG98 312 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 SLC30A5Q8TAD4 765 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 SAP25Q8TEE9 199 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 PPP1R16AQ96I34 528 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 OSBPL2Q9H1P3 480 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 ATP13A1Q9HD20 1204 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 ZNF212Q9UDV6 495 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 OR12D3Q9UGF7 316 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 IL36AQ9UHA7 158 aa20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 GOLGA4Q13439 2230 aaKnown RBP20.81■□□□□ 0.92
PDLIM4-206ENST00000474421 C2CD4BA6NLJ0 364 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms