RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, human

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKS1B-206	ENST00000474215	LRIG2	O94898	1065 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	FTL	P02792	175 aa	Predicted RBP	11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	SKIL	P12757	684 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	DES	P17661	470 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	GLDC	P23378	1020 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	L1CAM	P32004	1257 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	DRD3	P35462	400 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	ETFB	P38117	255 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	PBX1	P40424	430 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	MAPKAPK2	P49137	400 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	CCR5	P51681	352 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	METAP1	P53582	386 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	BNC1	Q01954	994 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	TEAD4	Q15561	434 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	EFHC2	Q5JST6	749 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	PLEKHA7	Q6IQ23	1121 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	PIP4P1	Q86T03	277 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	NLRP14	Q86W24	1093 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	OR2A12	Q8NGT7	310 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	PIP4K2C	Q8TBX8	421 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	TBC1D31	Q96DN5	1066 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	CCDC114	Q96M63	670 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	ACE2	Q9BYF1	805 aa	Predicted RBP	11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	KDM4C	Q9H3R0	1056 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	SLC32A1	Q9H598	525 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	TM9SF3	Q9HD45	589 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	TMEM248	Q9NWD8	314 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	DNAI1	Q9UI46	699 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	SLCO1B1	Q9Y6L6	691 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	NCOR2	Q9Y618	2525 aa		11.44	□□□□□ -0.58
CKS1B-206	ENST00000474215	TBC1D3D	A0A087WVF3	549 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TBC1D3I	A0A087WXS9	549 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TBC1D3E	A0A087X179	549 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TBC1D3K	A0A087X1G2	549 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	CXorf51A	A0A1B0GTR3	108 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215		A0A1W2PPC4	97 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TMEM191C	A6NGB0	347 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	C10orf142	B7Z368	130 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TBC1D3L	B9A6J9	549 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	PLK4	O00444	970 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	SLC7A4	O43246	635 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	RTN2	O75298	545 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	GJB3	O75712	270 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TBC1D3H	P0C7X1	549 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	CD59	P13987	128 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	CHRNA3	P32297	505 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	ACVRL1	P37023	503 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	ADPRH	P54922	357 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	AIF1	P55008	147 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	OGDH	Q02218	1023 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	CNTN1	Q12860	1018 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	HLA-B	Q31612	363 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TBC1D3G	Q6DHY5	549 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TBC1D3C	Q6IPX1	549 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	IL27RA	Q6UWB1	636 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TMC6	Q7Z403	805 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	PYROXD2	Q8N2H3	581 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	DEFB124	Q8NES8	71 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TMIE	Q8NEW7	156 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	SYN2	Q92777	582 aa	Predicted RBP	11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	ARHGEF2	Q92974	986 aa	Known RBP	11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	FAM131C	Q96AQ9	280 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	ORAI3	Q9BRQ5	295 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	CEP44	Q9C0F1	390 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	MAGEH1	Q9H213	219 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TNKS2	Q9H2K2	1166 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	GAREM1	Q9H706	876 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	NDFIP2	Q9NV92	336 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	TPX2	Q9ULW0	747 aa	Known RBP	11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	FZD10	Q9ULW2	581 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	HPCAL4	Q9UM19	191 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	CAPN11	Q9UMQ6	739 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	NEU3	Q9UQ49	428 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	ANKRD6	Q9Y2G4	727 aa		11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	BZW2	Q9Y6E2	419 aa	Known RBP	11.43	□□□□□ -0.58
CKS1B-206	ENST00000474215	PCDH15	Q96QU1	1955 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	RAMP2	O60895	175 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	ZNF821	O75541	412 aa	Predicted RBP	11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	CER1	O95813	267 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	CD160	O95971	181 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	PRNP	P04156	253 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	CTSL	P07711	333 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	EPHB2	P29323	1055 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	RECQL	P46063	649 aa	Predicted RBP	11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	GRIA4	P48058	902 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	SERPINH1	P50454	418 aa	Known RBP	11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	DNA2	P51530	1060 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	GEMIN4	P57678	1058 aa	Known RBP	11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	RACK1	P63244	317 aa	Known RBP	11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	ARF5	P84085	180 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	ZBED6	P86452	979 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	CCDC15	Q0P6D6	951 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	POLD3	Q15054	466 aa	Predicted RBP	11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	KIF19	Q2TAC6	998 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	POM121L1P	Q3SYA9	428 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	HGSNAT	Q68CP4	663 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	C22orf39	Q6P5X5	142 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	DPY19L3	Q6ZPD9	716 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms