RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 GBA3Q9H227 469 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 EPC1Q9H2F5 836 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 BRD9Q9H8M2 597 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 NT5MQ9NPB1 228 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 GDF3Q9NR23 364 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 ABCB8Q9NUT2 735 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 DNAJC17Q9NVM6 304 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 RBM22Q9NW64 420 aaKnown RBP eCLIP10.48□□□□□ -0.736e-6■■□□□ 14.1
PRPF38A-202ENST00000474048 MARK1Q9P0L2 795 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 SEPT3Q9UH03 358 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 CDH22Q9UJ99 828 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 GGA2Q9UJY4 613 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 NFU1Q9UMS0 254 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 SHOC2Q9UQ13 582 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 AAR2Q9Y312 384 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 NYNRINQ9P2P1 1898 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 TRIOBPQ9H2D6 2365 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 NUP205Q92621 2012 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 ERI2A8K979 691 aaKnown RBP10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 AP3B1O00203 1094 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 CHADO15335 359 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 PRAMEF11O60813 436 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 PENKP01210 267 aaPredicted RBP10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 CYP17A1P05093 508 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 ATP5BP06576 529 aaKnown RBP10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 ZSCAN5DPP0CG00 497 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 PABPC1P11940 636 aaKnown RBP10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 ETS1P14921 441 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 PTPN3P26045 913 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 GDI1P31150 447 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 ACVRL1P37023 503 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 RECQLP46063 649 aaPredicted RBP10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 GEMP55040 296 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 ARL4CP56559 192 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 RHOAP61586 193 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 ST8SIA6P61647 398 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 CDK16Q00536 496 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 COL19A1Q14993 1142 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 SLMAPQ14BN4 828 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 EML3Q32P44 896 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 FYB2Q5VWT5 728 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 GRAMD4Q6IC98 578 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 TANGO2Q6ICL3 276 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 CXorf57Q6NSI4 855 aaKnown RBP10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 EMBQ6PCB8 327 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 VITQ6UXI7 678 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 CENPUQ71F23 418 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 Q7L0L9 218 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 PDIK1LQ8N165 341 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 ZNF567Q8N184 647 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 NAT16Q8N8M0 369 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 UCMAQ8WVF2 138 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 FATE1Q969F0 183 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 MYEOVQ96EZ4 313 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 RUFY1Q96T51 708 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 LINC00597Q9H2U6 94 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 ACBD3Q9H3P7 528 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 EBF3Q9H4W6 596 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 USP29Q9HBJ7 922 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 DEC1Q9P2X7 70 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 EPS15L1Q9UBC2 864 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 RAB21Q9UL25 225 aa10.47□□□□□ -0.73
PRPF38A-202ENST00000474048 A0A0D9SEW6 157 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 F5H423 210 aaPredicted RBP10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 J3KR12 359 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 HOXC11O43248 304 aaPredicted RBP10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 MBTPS2O43462 519 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 ASLP04424 464 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 NFKB1P19838 968 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 CES1P23141 567 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 PSMB4P28070 264 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 LTBRP36941 435 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 CARSP49589 748 aaKnown RBP10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 SLC20A2Q08357 652 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 LMAN2Q12907 356 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 ZBTB17Q13105 803 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 RUNX3Q13761 415 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 HIF1AQ16665 826 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 PLEKHG6Q3KR16 790 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 ITPRIPL2Q3MIP1 535 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 DNAJC21Q5F1R6 531 aaKnown RBP10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 PITRM1Q5JRX3 1037 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 HABP4Q5JVS0 413 aaKnown RBP10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 FAXCQ5TGI0 409 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 TRIM68Q6AZZ1 485 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 NAPEPLDQ6IQ20 393 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 CCNI2Q6ZMN8 369 aaPredicted RBP10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 ARHGAP36Q6ZRI8 547 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 PRUNE1Q86TP1 453 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 LINC00523Q86TU6 105 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 TP53INP2Q8IXH6 220 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 ADGRG2Q8IZP9 1017 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 DNAAF3Q8N9W5 541 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 ATP11CQ8NB49 1132 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 NXPE3Q969Y0 559 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 IFT43Q96FT9 208 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 ZFYVE19Q96K21 471 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 TEKT5Q96M29 485 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms