RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 HS1BP3Q53T59 392 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 C3orf38Q5JPI3 329 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 CBWD3Q5JTY5 395 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 CBWD5Q5RIA9 395 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 PIP5KL1Q5T9C9 394 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 FAM46CQ5VWP2 391 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 RAP1GAP2Q684P5 730 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 CXorf57Q6NSI4 855 aaKnown RBP5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 LCLAT1Q6UWP7 414 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 FOXD4L3Q6VB84 417 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 Q6ZVU0 165 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 PRICKLE2Q7Z3G6 844 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 ABI3BPQ7Z7G0 1075 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 DSG4Q86SJ6 1040 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 TAC4Q86UU9 113 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 CHSY1Q86X52 802 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 CIR1Q86X95 450 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 CCDC117Q8IWD4 279 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 LGI2Q8N0V4 545 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 GUF1Q8N442 669 aaKnown RBP5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 OR13H1Q8NG92 308 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 IFI44Q8TCB0 444 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 OR8D1Q8WZ84 308 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 TFAP2BQ92481 460 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 ALG14Q96F25 216 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 KLHDC7BQ96G42 594 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 PRR11Q96HE9 360 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 APOLD1Q96LR9 279 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 SERPINB11Q96P15 392 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 MYOCQ99972 504 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 ZSWIM1Q9BR11 485 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 CALN1Q9BXU9 219 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 USP29Q9HBJ7 922 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 PREBQ9HCU5 417 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 FZD3Q9NPG1 666 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 GPR27Q9NS67 375 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 NLGN3Q9NZ94 848 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 PPM1HQ9ULR3 514 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 SATB2Q9UPW6 733 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 MAPK8IP1Q9UQF2 711 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 TLR6Q9Y2C9 796 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 COQ4Q9Y3A0 265 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 PCDHGA8Q9Y5G5 932 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 ITPR2Q14571 2701 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 A0A1W2PQU0 124 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 TCAF2A6NFQ2 919 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 CDRT15L2A8MXV6 281 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 C1QTNF3-AMACRE9PGA6 284 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 K7ESM1 405 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 M0QYV0 167 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 TERTO14746 1132 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 MCF2LO15068 1137 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 SCAMP1O15126 338 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 ALOX15BO15296 676 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 SLC31A1O15431 190 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 ATP9BO43861 1147 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 STX10O60499 249 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 NEBLO76041 1014 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 FBXO21O94952 628 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 IGLV3-25P01717 112 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 APOEP02649 317 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 CTSLP07711 333 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 PAEPP09466 180 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 EPB41P11171 864 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 GP1BBP13224 206 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 PFKFB1P16118 471 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 TACR2P21452 398 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 TGM2P21980 687 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 HNRNPA2B1P22626 353 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 RBMS1P29558 406 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 AKT2P31751 481 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 NNMTP40261 264 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 PLK1P53350 603 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 CLDN2P57739 230 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 HNRNPKP61978 463 aaKnown RBP eCLIP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 YWHAEP62258 255 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 SULT2A1Q06520 285 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 CLN3Q13286 438 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 EIF4EBP2Q13542 120 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 SLC12A1Q13621 1099 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 ZNF284Q2VY69 593 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 EDRF1Q3B7T1 1238 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 ZC3H12AQ5D1E8 599 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 FOXD4L5Q5VV16 416 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 SYPL2Q5VXT5 272 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 ZCCHC8Q6NZY4 707 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 NEK5Q6P3R8 708 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 GUSBP11Q6P575 273 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 TMEM270Q6UE05 265 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 GCNT7Q6ZNI0 430 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 CLEC14AQ86T13 490 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 HORMAD1Q86X24 394 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 CCAR2Q8N163 923 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 EXD3Q8N9H8 876 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 ZNF548Q8NEK5 533 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 MAPK15Q8TD08 544 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 FOXD4L4Q8WXT5 416 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 KLK6Q92876 244 aa5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 ERCC4Q92889 916 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-204ENST00000474025 GRAMD1AQ96CP6 724 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms