RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SPOPO43791 374 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 MT-CO1P00395 513 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 TCF4P15884 667 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 GLDCP23378 1020 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 CD6P30203 668 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 DHPSP49366 369 aaPredicted RBP14.04□□□□□ -0.16
USF1-205ENST00000473969 SERPINH1P50454 418 aaKnown RBP14.04□□□□□ -0.16
USF1-205ENST00000473969 TPMTP51580 245 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 PDK2Q15119 407 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 TCEAL1Q15170 157 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 CST6Q15828 149 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 SPDYCQ5MJ68 293 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 C22orf39Q6P5X5 142 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 TMCO3Q6UWJ1 677 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 Q6ZVU0 165 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 CYP4V2Q6ZWL3 525 aaPredicted RBP14.04□□□□□ -0.16
USF1-205ENST00000473969 POLNQ7Z5Q5 900 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 FAM124AQ86V42 546 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 MMAAQ8IVH4 418 aaKnown RBP14.04□□□□□ -0.16
USF1-205ENST00000473969 PCDH20Q8N6Y1 951 aaKnown RBP14.04□□□□□ -0.16
USF1-205ENST00000473969 FRS2Q8WU20 508 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 OMDQ99983 421 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 CALN1Q9BXU9 219 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 DUSP15Q9H1R2 295 aaPredicted RBP14.04□□□□□ -0.16
USF1-205ENST00000473969 GRPEL1Q9HAV7 217 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 PCDH18Q9HCL0 1135 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 K7ERQ8 282 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 DFFAO00273 331 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 ALOX15BO15296 676 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 ZMPSTE24O75844 475 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 TNNT1P13805 278 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 BCKDHBP21953 392 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 AMPD1P23109 780 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 SLC8A1P32418 973 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 SERPINB6P35237 376 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 PSMD8P48556 350 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 ARF5P84085 180 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 CCDC15Q0P6D6 951 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 SERINC3Q13530 473 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 SYCP2LQ5T4T6 812 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 TXNRD3NBQ6F5E7 133 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 RAD9BQ6WBX8 426 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 TMEFF1Q8IYR6 380 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 RYBPQ8N488 228 aaPredicted RBP14.03□□□□□ -0.16
USF1-205ENST00000473969 GPR161Q8N6U8 529 aaKnown RBP14.03□□□□□ -0.16
USF1-205ENST00000473969 CASKIN2Q8WXE0 1202 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 FOXJ1Q92949 421 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 HMCESQ96FZ2 354 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 TOE1Q96GM8 510 aaKnown RBP14.03□□□□□ -0.16
USF1-205ENST00000473969 CELF6Q96J87 481 aaKnown RBP14.03□□□□□ -0.16
USF1-205ENST00000473969 CSPG4P5Q96PW8 444 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 FAM129BQ96TA1 746 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 MAK16Q9BXY0 300 aaKnown RBP14.03□□□□□ -0.16
USF1-205ENST00000473969 BTBD1Q9H0C5 482 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 PABPC3Q9H361 631 aaKnown RBP14.03□□□□□ -0.16
USF1-205ENST00000473969 SP110Q9HB58 689 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 DYRK4Q9NR20 520 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 FBXL12Q9NXK8 326 aa14.03□□□□□ -0.16
USF1-205ENST00000473969 USP36Q9P275 1121 aaKnown RBP14.03□□□□□ -0.16
USF1-205ENST00000473969 FCF1Q9Y324 198 aaKnown RBP14.03□□□□□ -0.16
USF1-205ENST00000473969 MCF2LO15068 1137 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 MID1O15344 667 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 SMAD6O43541 496 aaKnown RBP14.02□□□□□ -0.17
USF1-205ENST00000473969 PRNPP04156 253 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 VAV1P15498 845 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 C5AR1P21730 350 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 DPP6P42658 865 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 PAPOLAP51003 745 aaKnown RBP14.02□□□□□ -0.17
USF1-205ENST00000473969 VAV2P52735 878 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 HADHBP55084 474 aaKnown RBP14.02□□□□□ -0.17
USF1-205ENST00000473969 TAS2R40P59535 323 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 SNRPD1P62314 119 aaKnown RBP14.02□□□□□ -0.17
USF1-205ENST00000473969 CREB5Q02930 508 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 RAD51Q06609 339 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 KIF5AQ12840 1032 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 DPYSQ14117 519 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 IFI16Q16666 785 aaKnown RBP14.02□□□□□ -0.17
USF1-205ENST00000473969 ATP13A4Q4VNC1 1196 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 CARD16Q5EG05 197 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 PMS2CLQ68D20 193 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 USP30Q70CQ3 517 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 CYP2U1Q7Z449 544 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 RHOT1Q8IXI2 618 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 HDDC3Q8N4P3 179 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 FRMD1Q8N878 549 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 CCDC112Q8NEF3 446 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 NSMCE1Q8WV22 266 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 ISG20Q96AZ6 181 aaKnown RBP14.02□□□□□ -0.17
USF1-205ENST00000473969 ZNF670Q9BS34 389 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 SLC39A8Q9C0K1 460 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 TNKS2Q9H2K2 1166 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 NOL6Q9H6R4 1146 aaKnown RBP14.02□□□□□ -0.17
USF1-205ENST00000473969 LRRC19Q9H756 370 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 SGK2Q9HBY8 427 aa14.02□□□□□ -0.17
USF1-205ENST00000473969 DDX56Q9NY93 547 aaKnown RBP14.02□□□□□ -0.17
USF1-205ENST00000473969 WSB2Q9NYS7 404 aaPredicted RBP14.02□□□□□ -0.17
USF1-205ENST00000473969 UBA2Q9UBT2 640 aaPredicted RBP14.02□□□□□ -0.17
USF1-205ENST00000473969 MBD1Q9UIS9 605 aaPredicted RBP14.02□□□□□ -0.17
USF1-205ENST00000473969 PCDHGA5Q9Y5G8 931 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms