RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 FAM120BQ96EK7 910 aaKnown RBP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 SMARCAD1Q9H4L7 1026 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 SH2D4AQ9H788 454 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 BRF2Q9HAW0 419 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 SLC2A4RGQ9NR83 387 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 TLR8Q9NR97 1041 aaKnown RBP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 ARL15Q9NXU5 204 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 PEMTQ9UBM1 199 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 IPO11Q9UI26 975 aaKnown RBP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 CDH22Q9UJ99 828 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 SNX8Q9Y5X2 465 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 KCNE2Q9Y6J6 123 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 MYO15BQ96JP2 1530 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 RSF1Q96T23 1441 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 ARHGAP10A1A4S6 786 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 LRRC53A6NM62 1247 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 MYO1GB0I1T2 1018 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 PTGES3LE9PB15 166 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 VILLO15195 856 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 CEP104O60308 925 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 KAT7O95251 611 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 CHRM5P08912 532 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-212ENST00000473961 CSH1P0DML2 217 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 CSH2P0DML3 217 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 TACR3P29371 465 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 AVPR2P30518 371 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 SNX16P57768 344 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 CREB5Q02930 508 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 EPS8Q12929 822 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 LSM12Q3MHD2 195 aaKnown RBP4.54□□□□□ -1.68
BRCA1-212ENST00000473961 DPCR1Q3MIW9 517 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 CDC73Q6P1J9 531 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 NCEH1Q6PIU2 408 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 SLC30A9Q6PML9 568 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 DHRS13Q6UX07 377 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 RANBP10Q6VN20 620 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 ENOSF1Q7L5Y1 443 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 KRT74Q7RTS7 529 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 TADA2BQ86TJ2 420 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 CNTROBQ8N137 903 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 SRBD1Q8N5C6 995 aaKnown RBP4.54□□□□□ -1.68
BRCA1-212ENST00000473961 FRMD1Q8N878 549 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 LSMEM1Q8N8F7 131 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 KCNG4Q8TDN1 519 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 CELF1Q92879 486 aaKnown RBP4.54□□□□□ -1.68
BRCA1-212ENST00000473961 CALML4Q96GE6 196 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 ADAD1Q96M93 576 aaKnown RBP4.54□□□□□ -1.68
BRCA1-212ENST00000473961 KLHL15Q96M94 604 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 TEFMQ96QE5 360 aaKnown RBP4.54□□□□□ -1.68
BRCA1-212ENST00000473961 NCAPGQ9BPX3 1015 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 H2AFJQ9BTM1 129 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 MLST8Q9BVC4 326 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 ITPAQ9BY32 194 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.54□□□□□ -1.68
BRCA1-212ENST00000473961 TTYH1Q9H313 450 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-212ENST00000473961 ANKEF1Q9NU02 776 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 BABAM1Q9NWV8 329 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 ZNF70Q9UC06 446 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-212ENST00000473961 ADD3Q9UEY8 706 aaKnown RBP4.54□□□□□ -1.68
BRCA1-212ENST00000473961 DTX4Q9Y2E6 619 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 PIAS3Q9Y6X2 628 aa4.54□□□□□ -1.68
BRCA1-212ENST00000473961 SETD1BQ9UPS6 1966 aaKnown RBP4.54□□□□□ -1.68
BRCA1-212ENST00000473961 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-212ENST00000473961 hCG_1807616A0A1W2PRN6 198 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 POC1B-GALNT4F8VUJ3 575 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 BCAT2O15382 392 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-212ENST00000473961 AHCYL1O43865 530 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 PORP16435 677 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-212ENST00000473961 ITPKBP27987 946 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 CHRNA5P30532 468 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 GABRB2P47870 512 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 ZNF84P51523 738 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 CYP2J2P51589 502 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 CYP4F2P78329 520 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 OLR1P78380 273 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 IRX6P78412 446 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-212ENST00000473961 AIMP2Q13155 320 aaKnown RBP4.53□□□□□ -1.68
BRCA1-212ENST00000473961 FOXE3Q13461 319 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 GAB1Q13480 694 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 PSMD6Q15008 389 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 C5orf22Q49AR2 442 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 MIIPQ5JXC2 388 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 FAM171A1Q5VUB5 890 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 TMEM268Q5VZI3 342 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 ATG9BQ674R7 924 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 SLC46A3Q7Z3Q1 461 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 NEK8Q86SG6 692 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 AMER2Q8N7J2 671 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 SCAIQ8N9R8 606 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 OR52N4Q8NGI2 321 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 CAGE1Q8TC20 777 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 C2CD4CQ8TF44 421 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 ZFPM2Q8WW38 1151 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 KAZALD1Q96I82 304 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 FRG2BQ96QU4 278 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 MAP7D2Q96T17 732 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 PIP5K1AQ99755 562 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 USP44Q9H0E7 712 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 KAT14Q9H8E8 782 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms