RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 HNRNPH2P55795 449 aaKnown RBP18.34■□□□□ 0.53
VARS2-206ENST00000473916 POLD3Q15054 466 aaPredicted RBP18.34■□□□□ 0.53
VARS2-206ENST00000473916 GLIPR1L2Q4G1C9 344 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 TXNDC8Q6A555 127 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 KLHDC8BQ8IXV7 354 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 CLP1Q92989 425 aaKnown RBP18.34■□□□□ 0.53
VARS2-206ENST00000473916 ZFRQ96KR1 1074 aaKnown RBP18.34■□□□□ 0.53
VARS2-206ENST00000473916 FCRL5Q96RD9 977 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 KLF16Q9BXK1 252 aaPredicted RBP18.34■□□□□ 0.53
VARS2-206ENST00000473916 ATXN3LQ9H3M9 355 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 LRRC40Q9H9A6 602 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 NT5MQ9NPB1 228 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 PSAT1Q9Y617 370 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 RPS6KL1Q9Y6S9 549 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 HMX2A2RU54 273 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 ERI2A8K979 691 aaKnown RBP18.33■□□□□ 0.53
VARS2-206ENST00000473916 FAM107AO95990 144 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 F11P03951 625 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 DRD4P21917 467 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 ETFBP38117 255 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 ERVFC1P60507 584 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 PRPSAP1Q14558 356 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 SLC1A5Q15758 541 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 LRRC34Q8IZ02 419 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 HS6ST3Q8IZP7 471 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 TTC16Q8NEE8 873 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 DENND1AQ8TEH3 1009 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 DYDC1Q8WWB3 177 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 FICDQ9BVA6 458 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 SP110Q9HB58 689 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 PRKAG2Q9UGJ0 569 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 AGO1Q9UL18 857 aaKnown RBP18.33■□□□□ 0.53
VARS2-206ENST00000473916 INSL6Q9Y581 213 aa18.33■□□□□ 0.53
VARS2-206ENST00000473916 TRIM49D1C9J1S8 452 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 H3BNC9 293 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 PRPF4O43172 522 aaKnown RBP eCLIP18.33■□□□□ 0.52
VARS2-206ENST00000473916 TSPAN3O60637 253 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 ALDH1A2O94788 518 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 CXCL14O95715 111 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 ERVK-10P10266 1014 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 CA4P22748 312 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 DNAJB1P25685 340 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 SLC11A2P49281 568 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 CYP4F8P98187 520 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 NIPAL4Q0D2K0 466 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 SERINC3Q13530 473 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 MICALCLQ6ZW33 695 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 TMC7Q7Z402 723 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 PGBD5Q8N414 524 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 ARL14EPQ8N8R7 260 aaPredicted RBP18.33■□□□□ 0.52
VARS2-206ENST00000473916 ZNF669Q96BR6 464 aaPredicted RBP18.33■□□□□ 0.52
VARS2-206ENST00000473916 PLD4Q96BZ4 506 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 MFSD3Q96ES6 412 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 CHMP6Q96FZ7 201 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 ZNF778Q96MU6 729 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 PAIP2Q9BPZ3 127 aaKnown RBP18.33■□□□□ 0.52
VARS2-206ENST00000473916 TBL1YQ9BQ87 522 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 CHRAC1Q9NRG0 131 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.33■□□□□ 0.52
VARS2-206ENST00000473916 NKIRAS1Q9NYS0 192 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 BFARQ9NZS9 450 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 SAMD15Q9P1V8 674 aa18.33■□□□□ 0.52
VARS2-206ENST00000473916 HIDE1A8MVS5 230 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 MBL2P11226 248 aaPredicted RBP18.32■□□□□ 0.52
VARS2-206ENST00000473916 CHRNA4P43681 627 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 PCSK7Q16549 785 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 C5orf22Q49AR2 442 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 DENND5AQ6IQ26 1287 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 HERC6Q8IVU3 1022 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 OR7D4Q8NG98 312 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 ADAMTS19Q8TE59 1207 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 MCOLN1Q9GZU1 580 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 CCDC134Q9H6E4 229 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 SENP1Q9P0U3 644 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 IQANK1A0A1B0GTG1 560 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 SRRM3A6NNA2 597 aaPredicted RBP18.32■□□□□ 0.52
VARS2-206ENST00000473916 NEBLO76041 1014 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 ARHGEF15O94989 841 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 MT-ND3P03897 115 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 PYGBP11216 843 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 GJA1P17302 382 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 GLDCP23378 1020 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 FOXN2P32314 431 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 DSC2Q02487 901 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 NAPEPLDQ6IQ20 393 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 SH2D5Q6ZV89 423 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 GAREM2Q75VX8 874 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 LRRC49Q8IUZ0 686 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 MRGPRX2Q96LB1 330 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 TCF25Q9BQ70 676 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 SLC17A7Q9P2U7 560 aa18.32■□□□□ 0.52
VARS2-206ENST00000473916 MTCL1Q9Y4B5 1905 aaKnown RBP18.31■□□□□ 0.52
VARS2-206ENST00000473916 ZCWPW2A0A1B0GU75 182 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 ADRA1AP35348 466 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 MAPKAPK2P49137 400 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 ITKQ08881 620 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 HNRNPDQ14103 355 aaKnown RBP18.31■□□□□ 0.52
VARS2-206ENST00000473916 ANO4Q32M45 955 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 STXBP5Q5T5C0 1151 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 MROH9Q5TGP6 573 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms