RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 NRBP1Q9UHY1 535 aa2.58□□□□□ -2
CALD1-216ENST00000473714 HPSEQ9Y251 543 aa2.58□□□□□ -2
CALD1-216ENST00000473714 MTO1Q9Y2Z2 717 aaKnown RBP2.58□□□□□ -2
CALD1-216ENST00000473714 ITIH6Q6UXX5 1313 aa2.58□□□□□ -2
CALD1-216ENST00000473714 COL6A6A6NMZ7 2263 aa2.58□□□□□ -2
CALD1-216ENST00000473714 PATJQ8NI35 1801 aa2.58□□□□□ -2
CALD1-216ENST00000473714 ROBO3Q96MS0 1386 aa2.58□□□□□ -2
CALD1-216ENST00000473714 GREB1Q4ZG55 1949 aa2.58□□□□□ -2
CALD1-216ENST00000473714 MIA3Q5JRA6 1907 aa2.58□□□□□ -2
CALD1-216ENST00000473714 A0A0B4J269 797 aa2.57□□□□□ -2
CALD1-216ENST00000473714 PNMA6EA0A0J9YXQ4 647 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CCDC196A0A1B0GTZ2 297 aa2.57□□□□□ -2
CALD1-216ENST00000473714 A6NLC8 198 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CCP110O43303 1012 aa2.57□□□□□ -2
CALD1-216ENST00000473714 FIBPO43427 364 aa2.57□□□□□ -2
CALD1-216ENST00000473714 SRGAP2O75044 1071 aa2.57□□□□□ -2
CALD1-216ENST00000473714 DNAJB5O75953 348 aa2.57□□□□□ -2
CALD1-216ENST00000473714 IPO13O94829 963 aaKnown RBP2.57□□□□□ -2
CALD1-216ENST00000473714 GLP2RO95838 553 aa2.57□□□□□ -2
CALD1-216ENST00000473714 ASGR1P07306 291 aa2.57□□□□□ -2
CALD1-216ENST00000473714 ATXN1LP0C7T5 689 aaKnown RBP2.57□□□□□ -2
CALD1-216ENST00000473714 SPATA31D3P0C874 917 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CKBP12277 381 aa2.57□□□□□ -2
CALD1-216ENST00000473714 PECAM1P16284 738 aaPredicted RBP2.57□□□□□ -2
CALD1-216ENST00000473714 NPPBP16860 134 aa2.57□□□□□ -2
CALD1-216ENST00000473714 SP100P23497 879 aaPredicted RBP2.57□□□□□ -2
CALD1-216ENST00000473714 SLC6A2P23975 617 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CST5P28325 142 aaPredicted RBP2.57□□□□□ -2
CALD1-216ENST00000473714 GABRB3P28472 473 aa2.57□□□□□ -2
CALD1-216ENST00000473714 LRPAP1P30533 357 aa2.57□□□□□ -2
CALD1-216ENST00000473714 VIPR2P41587 438 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CLNS1AP54105 237 aaKnown RBP2.57□□□□□ -2
CALD1-216ENST00000473714 WNT3P56703 355 aa2.57□□□□□ -2
CALD1-216ENST00000473714 LILRA4P59901 499 aa2.57□□□□□ -2
CALD1-216ENST00000473714 UBE3AQ05086 875 aa2.57□□□□□ -2
CALD1-216ENST00000473714 NSUN2Q08J23 767 aaKnown RBP eCLIP2.57□□□□□ -2
CALD1-216ENST00000473714 RIN1Q13671 783 aa2.57□□□□□ -2
CALD1-216ENST00000473714 SIM2Q14190 667 aaPredicted RBP2.57□□□□□ -2
CALD1-216ENST00000473714 KCNAB1Q14722 419 aa2.57□□□□□ -2
CALD1-216ENST00000473714 GRM7Q14831 915 aa2.57□□□□□ -2
CALD1-216ENST00000473714 TOMM20Q15388 145 aa2.57□□□□□ -2
CALD1-216ENST00000473714 BMT2Q1RMZ1 405 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CCDC30Q5VVM6 783 aa2.57□□□□□ -2
CALD1-216ENST00000473714 TSHZ3Q63HK5 1081 aa2.57□□□□□ -2
CALD1-216ENST00000473714 ANKS6Q68DC2 871 aa2.57□□□□□ -2
CALD1-216ENST00000473714 SNRNP48Q6IEG0 339 aaKnown RBP2.57□□□□□ -2
CALD1-216ENST00000473714 ZDHHC24Q6UX98 284 aa2.57□□□□□ -2
CALD1-216ENST00000473714 KRBA2Q6ZNG9 492 aa2.57□□□□□ -2
CALD1-216ENST00000473714 RINLQ6ZS11 566 aa2.57□□□□□ -2
CALD1-216ENST00000473714 SPATA31D4Q6ZUB0 917 aa2.57□□□□□ -2
CALD1-216ENST00000473714 RAB11FIP2Q7L804 512 aa2.57□□□□□ -2
CALD1-216ENST00000473714 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.57□□□□□ -2
CALD1-216ENST00000473714 LRRTM4Q86VH4 590 aa2.57□□□□□ -2
CALD1-216ENST00000473714 KRT73Q86Y46 540 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CCDC28AQ8IWP9 274 aa2.57□□□□□ -2
CALD1-216ENST00000473714 FSTL5Q8N475 847 aaPredicted RBP2.57□□□□□ -2
CALD1-216ENST00000473714 MB21D1Q8N884 522 aa2.57□□□□□ -2
CALD1-216ENST00000473714 PDPRQ8NCN5 879 aa2.57□□□□□ -2
CALD1-216ENST00000473714 NSUN7Q8NE18 718 aaKnown RBP2.57□□□□□ -2
CALD1-216ENST00000473714 TMIEQ8NEW7 156 aa2.57□□□□□ -2
CALD1-216ENST00000473714 OR6Y1Q8NGX8 325 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CEP70Q8NHQ1 597 aa2.57□□□□□ -2
CALD1-216ENST00000473714 SLC30A5Q8TAD4 765 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CPT1CQ8TCG5 803 aa2.57□□□□□ -2
CALD1-216ENST00000473714 BPIFB1Q8TDL5 484 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CSGALNACT1Q8TDX6 532 aa2.57□□□□□ -2
CALD1-216ENST00000473714 FAM151AQ8WW52 585 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CFHR4Q92496 578 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CPT1BQ92523 772 aa2.57□□□□□ -2
CALD1-216ENST00000473714 ZNF512Q96ME7 567 aaPredicted RBP2.57□□□□□ -2
CALD1-216ENST00000473714 TRIB1Q96RU8 372 aa2.57□□□□□ -2
CALD1-216ENST00000473714 TESK2Q96S53 571 aa2.57□□□□□ -2
CALD1-216ENST00000473714 GPHA2Q96T91 129 aa2.57□□□□□ -2
CALD1-216ENST00000473714 SPATA5L1Q9BVQ7 753 aa2.57□□□□□ -2
CALD1-216ENST00000473714 SLC25A32Q9H2D1 315 aa2.57□□□□□ -2
CALD1-216ENST00000473714 PDCL3Q9H2J4 239 aa2.57□□□□□ -2
CALD1-216ENST00000473714 DHX36Q9H2U1 1008 aaKnown RBP2.57□□□□□ -2
CALD1-216ENST00000473714 NELFAQ9H3P2 528 aa2.57□□□□□ -2
CALD1-216ENST00000473714 FAM83DQ9H4H8 585 aa2.57□□□□□ -2
CALD1-216ENST00000473714 CHODLQ9H9P2 273 aa2.57□□□□□ -2
CALD1-216ENST00000473714 GPR35Q9HC97 309 aa2.57□□□□□ -2
CALD1-216ENST00000473714 ERVK-5Q9HDB9 667 aa2.57□□□□□ -2
CALD1-216ENST00000473714 WASH6PQ9NQA3 447 aa2.57□□□□□ -2
CALD1-216ENST00000473714 FBXO34Q9NWN3 711 aa2.57□□□□□ -2
CALD1-216ENST00000473714 BCCIPQ9P287 314 aaKnown RBP eCLIP2.57□□□□□ -2
CALD1-216ENST00000473714 BAG5Q9UL15 447 aa2.57□□□□□ -2
CALD1-216ENST00000473714 USP22Q9UPT9 525 aa2.57□□□□□ -2
CALD1-216ENST00000473714 HS3ST4Q9Y661 456 aa2.57□□□□□ -2
CALD1-216ENST00000473714 MCM3APO60318 1980 aa2.57□□□□□ -2
CALD1-216ENST00000473714 GRIN2DO15399 1336 aa2.57□□□□□ -2
CALD1-216ENST00000473714 KIF16BQ96L93 1317 aa2.57□□□□□ -2
CALD1-216ENST00000473714 SETD2Q9BYW2 2564 aaPredicted RBP2.56□□□□□ -2
CALD1-216ENST00000473714 CELSR3Q9NYQ7 3312 aa2.56□□□□□ -2
CALD1-216ENST00000473714 A0A1B0GVC2 190 aa2.56□□□□□ -2
CALD1-216ENST00000473714 MYADML2A6NDP7 307 aa2.56□□□□□ -2
CALD1-216ENST00000473714 PRSS29PA6NIE9 313 aa2.56□□□□□ -2
CALD1-216ENST00000473714 EFCAB8A8MWE9 144 aa2.56□□□□□ -2
CALD1-216ENST00000473714 E7EVH7 732 aa2.56□□□□□ -2
CALD1-216ENST00000473714 F5H697 171 aa2.56□□□□□ -2
CALD1-216ENST00000473714 SNAP23O00161 211 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms