RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	SPATA1	Q5VX52	437 aa		5.04	□□□□□ -1.6
BBX-223	ENST00000473542	PNLDC1	Q8NA58	520 aa	Known RBP	5.04	□□□□□ -1.6
BBX-223	ENST00000473542	SETD9	Q8NE22	299 aa		5.04	□□□□□ -1.6
BBX-223	ENST00000473542	SEMA6D	Q8NFY4	1073 aa		5.04	□□□□□ -1.6
BBX-223	ENST00000473542	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	5.04	□□□□□ -1.6
BBX-223	ENST00000473542	NR1H4	Q96RI1	486 aa	Predicted RBP	5.04	□□□□□ -1.6
BBX-223	ENST00000473542	TM2D2	Q9BX73	214 aa		5.04	□□□□□ -1.6
BBX-223	ENST00000473542	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
BBX-223	ENST00000473542	UPB1	Q9UBR1	384 aa		5.04	□□□□□ -1.6
BBX-223	ENST00000473542	NAALADL1	Q9UQQ1	740 aa		5.04	□□□□□ -1.6
BBX-223	ENST00000473542	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	5.03	□□□□□ -1.6
BBX-223	ENST00000473542	ANKRD18B	A2A2Z9	1011 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	OR6C68	A6NDL8	312 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	SMIM22	K7EJ46	135 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	TNFSF14	O43557	240 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	STRN	O43815	780 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	CLEC3B	P05452	202 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	UROD	P06132	367 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	CD63	P08962	238 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	HSPA1A	P0DMV8	641 aa	Known RBP	5.03	□□□□□ -1.6
BBX-223	ENST00000473542	HSPA1B	P0DMV9	641 aa	Known RBP	5.03	□□□□□ -1.6
BBX-223	ENST00000473542	COX7A2	P14406	83 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	HOXA7	P31268	230 aa	Predicted RBP	5.03	□□□□□ -1.6
BBX-223	ENST00000473542	BLK	P51451	505 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	PRKG2	Q13237	762 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	MTA1	Q13330	715 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	PDE1C	Q14123	709 aa	Predicted RBP	5.03	□□□□□ -1.6
BBX-223	ENST00000473542	C5orf22	Q49AR2	442 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	CCDC30	Q5VVM6	783 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	NAPEPLD	Q6IQ20	393 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	SLC22A25	Q6T423	547 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	MON1A	Q86VX9	555 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	CHD1L	Q86WJ1	897 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	DIS3L2	Q8IYB7	885 aa	Known RBP	5.03	□□□□□ -1.6
BBX-223	ENST00000473542	SCAI	Q8N9R8	606 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	C8orf58	Q8NAV2	365 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	C11orf65	Q8NCR3	313 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	HDAC7	Q8WUI4	952 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	SAAL1	Q96ER3	474 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	CLMN	Q96JQ2	1002 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	ZNF778	Q96MU6	729 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	TEFM	Q96QE5	360 aa	Known RBP	5.03	□□□□□ -1.6
BBX-223	ENST00000473542	SLC29A3	Q9BZD2	475 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	SARDH	Q9UL12	918 aa		5.03	□□□□□ -1.6
BBX-223	ENST00000473542	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	5.02	□□□□□ -1.61
BBX-223	ENST00000473542		A0A1W2PQM1	296 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	PI4KAP2	A4QPH2	592 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	LINC01548	A6NM66	108 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	KIF1C	O43896	1103 aa	Known RBP	5.02	□□□□□ -1.61
BBX-223	ENST00000473542	ZBED4	O75132	1171 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	NHLRC4	P0CG21	123 aa	Predicted RBP	5.02	□□□□□ -1.61
BBX-223	ENST00000473542	UBL4A	P11441	157 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	FCGR2A	P12318	317 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	ST6GAL1	P15907	406 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	CHRNA5	P30532	468 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	ABCD1	P33897	745 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	SKIV2L2	P42285	1042 aa	Known RBP	5.02	□□□□□ -1.61
BBX-223	ENST00000473542	PROK1	P58294	105 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	UFM1	P61960	85 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	TFF2	Q03403	129 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	ZBTB16	Q05516	673 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	ERV3-1	Q14264	604 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	RPE65	Q16518	533 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	AP5B1	Q2VPB7	878 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	KIAA1755	Q5JYT7	1200 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	GPATCH4	Q5T3I0	446 aa	Known RBP	5.02	□□□□□ -1.61
BBX-223	ENST00000473542	MEX3C	Q5U5Q3	659 aa	Known RBP	5.02	□□□□□ -1.61
BBX-223	ENST00000473542	FAM171A1	Q5VUB5	890 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	CFAP161	Q6P656	301 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	C17orf99	Q6UX52	265 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	LRIG3	Q6UXM1	1119 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	ATF7IP	Q6VMQ6	1270 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	RRM2B	Q7LG56	351 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	PTF1A	Q7RTS3	328 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	RNF144B	Q7Z419	303 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	CCDC105	Q8IYK2	499 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	ADSSL1	Q8N142	457 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	CPXM2	Q8N436	756 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	NGEF	Q8N5V2	710 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	OSR1	Q8TAX0	266 aa	Predicted RBP	5.02	□□□□□ -1.61
BBX-223	ENST00000473542	SMG7	Q92540	1137 aa	Known RBP	5.02	□□□□□ -1.61
BBX-223	ENST00000473542	HSPH1	Q92598	858 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	MAP4K1	Q92918	833 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	CHCHD6	Q9BRQ6	235 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	PLEKHA5	Q9HAU0	1116 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	MLXIPL	Q9NP71	852 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	5.02	□□□□□ -1.61
BBX-223	ENST00000473542	ZDHHC7	Q9NXF8	308 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	GRHL1	Q9NZI5	618 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	IPO11	Q9UI26	975 aa	Known RBP	5.02	□□□□□ -1.61
BBX-223	ENST00000473542	DHDH	Q9UQ10	334 aa		5.02	□□□□□ -1.61
BBX-223	ENST00000473542	MST1R	Q04912	1400 aa		5.01	□□□□□ -1.61
BBX-223	ENST00000473542	MSI1	O43347	362 aa	Known RBP	5.01	□□□□□ -1.61
BBX-223	ENST00000473542	RNASEH2A	O75792	299 aa	Known RBP	5.01	□□□□□ -1.61
BBX-223	ENST00000473542	CCNDBP1	O95273	360 aa		5.01	□□□□□ -1.61
BBX-223	ENST00000473542	SERPINC1	P01008	464 aa		5.01	□□□□□ -1.61
BBX-223	ENST00000473542	LDHC	P07864	332 aa		5.01	□□□□□ -1.61
BBX-223	ENST00000473542	HSP90AA1	P07900	732 aa	Known RBP	5.01	□□□□□ -1.61
BBX-223	ENST00000473542	BSG	P35613	385 aa		5.01	□□□□□ -1.61
BBX-223	ENST00000473542	POLD2	P49005	469 aa		5.01	□□□□□ -1.61

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