RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 SERPINH1P50454 418 aaKnown RBP21.22■□□□□ 0.99
TOP3A-204ENST00000472959 TMPRSS6Q8IU80 811 aa21.22■□□□□ 0.99
TOP3A-204ENST00000472959 ARHGAP12Q8IWW6 846 aa21.22■□□□□ 0.99
TOP3A-204ENST00000472959 KATNAL2Q8IYT4 538 aa21.22■□□□□ 0.99
TOP3A-204ENST00000472959 PCDH19Q8TAB3 1148 aa21.22■□□□□ 0.99
TOP3A-204ENST00000472959 UBE2Q2Q8WVN8 375 aa21.22■□□□□ 0.99
TOP3A-204ENST00000472959 CASKIN2Q8WXE0 1202 aa21.22■□□□□ 0.99
TOP3A-204ENST00000472959 PTPRN2Q92932 1015 aa21.22■□□□□ 0.99
TOP3A-204ENST00000472959 CELF6Q96J87 481 aaKnown RBP21.22■□□□□ 0.99
TOP3A-204ENST00000472959 MKRN2Q9H000 416 aaKnown RBP21.22■□□□□ 0.99
TOP3A-204ENST00000472959 ETNK2Q9NVF9 386 aa21.22■□□□□ 0.99
TOP3A-204ENST00000472959 MUC6Q6W4X9 2439 aa21.21■□□□□ 0.99
TOP3A-204ENST00000472959 C3orf70A6NLC5 250 aaPredicted RBP21.21■□□□□ 0.99
TOP3A-204ENST00000472959 LILRB5O75023 590 aa21.21■□□□□ 0.99
TOP3A-204ENST00000472959 NDUFV2P19404 249 aa21.21■□□□□ 0.99
TOP3A-204ENST00000472959 PAPOLAP51003 745 aaKnown RBP21.21■□□□□ 0.99
TOP3A-204ENST00000472959 COPAP53621 1224 aa21.21■□□□□ 0.99
TOP3A-204ENST00000472959 BYSLQ13895 437 aaKnown RBP21.21■□□□□ 0.99
TOP3A-204ENST00000472959 ELAVL3Q14576 367 aaKnown RBP21.21■□□□□ 0.99
TOP3A-204ENST00000472959 USP39Q53GS9 565 aaKnown RBP21.21■□□□□ 0.99
TOP3A-204ENST00000472959 INO80DQ53TQ3 878 aaPredicted RBP21.21■□□□□ 0.99
TOP3A-204ENST00000472959 RCOR2Q8IZ40 523 aa21.21■□□□□ 0.99
TOP3A-204ENST00000472959 PRCCQ92733 491 aaPredicted RBP21.21■□□□□ 0.99
TOP3A-204ENST00000472959 ISG20Q96AZ6 181 aaKnown RBP21.21■□□□□ 0.99
TOP3A-204ENST00000472959 CCDC114Q96M63 670 aa21.21■□□□□ 0.99
TOP3A-204ENST00000472959 RNF157Q96PX1 679 aa21.21■□□□□ 0.99
TOP3A-204ENST00000472959 MAK16Q9BXY0 300 aaKnown RBP21.21■□□□□ 0.99
TOP3A-204ENST00000472959 RSPH9Q9H1X1 276 aaPredicted RBP21.21■□□□□ 0.99
TOP3A-204ENST00000472959 MTG2Q9H4K7 406 aa21.21■□□□□ 0.99
TOP3A-204ENST00000472959 GUCA1BQ9UMX6 200 aa21.21■□□□□ 0.99
TOP3A-204ENST00000472959 CCDC66A2RUB6 948 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 K7ERQ8 282 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 DFFAO00273 331 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 SMAD6O43541 496 aaKnown RBP21.2■□□□□ 0.98
TOP3A-204ENST00000472959 RNASEH1O60930 286 aaKnown RBP21.2■□□□□ 0.98
TOP3A-204ENST00000472959 ZNF217O75362 1048 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 PALMO75781 387 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 ZRANB2O95218 330 aaKnown RBP eCLIP21.2■□□□□ 0.98
TOP3A-204ENST00000472959 CTNNA2P26232 953 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 CTNNA1P35221 906 aaKnown RBP21.2■□□□□ 0.98
TOP3A-204ENST00000472959 ZBTB16Q05516 673 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 PAFAH1B3Q15102 231 aaKnown RBP21.2■□□□□ 0.98
TOP3A-204ENST00000472959 LRRC49Q8IUZ0 686 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 PCDH20Q8N6Y1 951 aaKnown RBP21.2■□□□□ 0.98
TOP3A-204ENST00000472959 RNF25Q96BH1 459 aaPredicted RBP21.2■□□□□ 0.98
TOP3A-204ENST00000472959 ERLEC1Q96DZ1 483 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 SIPA1Q96FS4 1042 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 AMFRQ9UKV5 643 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 PPP2R2CQ9Y2T4 447 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 MFHAS1Q9Y4C4 1052 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 FARP1Q9Y4F1 1045 aaPredicted RBP21.2■□□□□ 0.98
TOP3A-204ENST00000472959 PCDHA3Q9Y5H8 950 aa21.2■□□□□ 0.98
TOP3A-204ENST00000472959 MUC22E2RYF6 1773 aaPredicted RBP21.2■□□□□ 0.98
TOP3A-204ENST00000472959 ALOX15BO15296 676 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 PRAMEF11O60813 436 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 CD160O95971 181 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 NBL1P41271 181 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 TAZQ16635 292 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 ZNF776Q68DI1 518 aaPredicted RBP21.19■□□□□ 0.98
TOP3A-204ENST00000472959 C22orf39Q6P5X5 142 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 KIAA1324Q6UXG2 1013 aaKnown RBP21.19■□□□□ 0.98
TOP3A-204ENST00000472959 Q6ZVU0 165 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 PEX26Q7Z412 305 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 DSG4Q86SJ6 1040 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 NT5DC3Q86UY8 548 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 PLPP6Q8IY26 295 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 PQLC3Q8N755 202 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 EXD1Q8NHP7 514 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.19■□□□□ 0.98
TOP3A-204ENST00000472959 GAB3Q8WWW8 586 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 RBM41Q96IZ5 413 aaKnown RBP21.19■□□□□ 0.98
TOP3A-204ENST00000472959 TPSD1Q9BZJ3 242 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 SEMA4AQ9H3S1 761 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 RAPGEFL1Q9UHV5 662 aa21.19■□□□□ 0.98
TOP3A-204ENST00000472959 MIF4GDA9UHW6 222 aaKnown RBP21.18■□□□□ 0.98
TOP3A-204ENST00000472959 MCF2LO15068 1137 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 RPP40O75818 363 aaKnown RBP21.18■□□□□ 0.98
TOP3A-204ENST00000472959 VAV1P15498 845 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 ZFXP17010 805 aaPredicted RBP21.18■□□□□ 0.98
TOP3A-204ENST00000472959 RECQLP46063 649 aaPredicted RBP21.18■□□□□ 0.98
TOP3A-204ENST00000472959 RPS14P62263 151 aaKnown RBP21.18■□□□□ 0.98
TOP3A-204ENST00000472959 IL10RBQ08334 325 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 CCDC173Q0VFZ6 552 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 NCBP2-AS2Q69YL0 99 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 C11orf74Q86VG3 221 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 STK40Q8N2I9 435 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 OR8D1Q8WZ84 308 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 KRT35Q92764 455 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 SPACA7Q96KW9 195 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 FAM129BQ96TA1 746 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 SLC6A17Q9H1V8 727 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 SP110Q9HB58 689 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 PDFQ9HBH1 243 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 UBA2Q9UBT2 640 aaPredicted RBP21.18■□□□□ 0.98
TOP3A-204ENST00000472959 IPO11Q9UI26 975 aaKnown RBP21.18■□□□□ 0.98
TOP3A-204ENST00000472959 SCML1Q9UN30 329 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 R4GN57 208 aa21.18■□□□□ 0.98
TOP3A-204ENST00000472959 J3KR12 359 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 HRO43593 1189 aa21.17■□□□□ 0.98
TOP3A-204ENST00000472959 ZNF821O75541 412 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms