RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 RFPL3O75679 317 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 UCHL3P15374 230 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 RRM1P23921 792 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 OR1E1P30953 314 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 CHRNA3P32297 505 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 FLT3P36888 993 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 RXRGP48443 463 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 CLCN6P51797 869 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 CCDC15Q0P6D6 951 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 DNAJC3Q13217 504 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 NOP9Q86U38 636 aaKnown RBP20.23■□□□□ 0.83
COL9A3-210ENST00000472880 TMPRSS12Q86WS5 348 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 SPATS2Q86XZ4 545 aaKnown RBP20.23■□□□□ 0.83
COL9A3-210ENST00000472880 C1orf74Q96LT6 269 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 TMPRSS4Q9NRS4 437 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 MPP6Q9NZW5 540 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 RAXQ9Y2V3 346 aa20.23■□□□□ 0.83
COL9A3-210ENST00000472880 IGLV3-10A0A075B6K4 115 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 A0A0D9SEW6 157 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 TRABD2BA6NFA1 517 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 DRGXA6NNA5 263 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 F8VZ95 297 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 K7ERQ8 282 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 RNGTTO60942 597 aaKnown RBP20.22■□□□□ 0.83
COL9A3-210ENST00000472880 PRNPP04156 253 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 CTSLP07711 333 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 CDK4P11802 303 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 HNF1BP35680 557 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 RECQLP46063 649 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-210ENST00000472880 C2CD6Q53TS8 623 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 PIP5KL1Q5T9C9 394 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 C22orf39Q6P5X5 142 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 C19orf48Q6RUI8 117 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 LINGO4Q6UY18 593 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 PDCD7Q8N8D1 485 aaKnown RBP20.22■□□□□ 0.83
COL9A3-210ENST00000472880 OR2A12Q8NGT7 310 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 EPS8L1Q8TE68 723 aa20.22■□□□□ 0.83
COL9A3-210ENST00000472880 NAA15Q9BXJ9 866 aaKnown RBP20.22■□□□□ 0.83
COL9A3-210ENST00000472880 SAMSN1Q9NSI8 373 aaKnown RBP20.22■□□□□ 0.83
COL9A3-210ENST00000472880 SRGAP2O75044 1071 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 MMEP08473 750 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 C1SP09871 688 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 EEF1GP26641 437 aaKnown RBP20.21■□□□□ 0.83
COL9A3-210ENST00000472880 ACADVLP49748 655 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 TAS2R38P59533 333 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 NOMO3P69849 1222 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 CYP4F3Q08477 520 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 BNIP3Q12983 259 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 CAMK2BQ13554 666 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 TCP11X2Q5H9J9 407 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 SFMBT2Q5VUG0 894 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 NAA35Q5VZE5 725 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 FAM131BQ86XD5 332 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 TMIEQ8NEW7 156 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 OR7D4Q8NG98 312 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 GRIN3AQ8TCU5 1115 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 CPA5Q8WXQ8 436 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 KLHDC7BQ96G42 594 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 PPP1R16AQ96I34 528 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 CFAP57Q96MR6 1250 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 HAPLN3Q96S86 360 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 MYOCQ99972 504 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 STK33Q9BYT3 514 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 TNKS2Q9H2K2 1166 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 TAB2Q9NYJ8 693 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 IL36AQ9UHA7 158 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 CA5BQ9Y2D0 317 aa20.21■□□□□ 0.83
COL9A3-210ENST00000472880 ANKRD11Q6UB99 2663 aaPredicted RBP20.2■□□□□ 0.82
COL9A3-210ENST00000472880 ADAMTS20P59510 1910 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 A0A1W2PQU0 124 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 ILVBLA1L0T0 632 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 SMAD6O43541 496 aaKnown RBP20.2■□□□□ 0.82
COL9A3-210ENST00000472880 PRLRP16471 622 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 TRNP1Q6NT89 227 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 RETSATQ6NUM9 610 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 NEK5Q6P3R8 708 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 ZNF783Q6ZMS7 281 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 CHST14Q8NCH0 376 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 ARRDC3Q96B67 414 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 SPON2Q9BUD6 331 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 ZYG11BQ9C0D3 744 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 ATP13A1Q9HD20 1204 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 METTL5Q9NRN9 209 aaKnown RBP20.2■□□□□ 0.82
COL9A3-210ENST00000472880 TMEM59LQ9UK28 342 aa20.2■□□□□ 0.82
COL9A3-210ENST00000472880 ZFYVE26Q68DK2 2539 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 SLC31A1O15431 190 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 SDC3O75056 442 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 JUPP14923 745 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 GLDCP23378 1020 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 AKT2P31751 481 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 ATP11AP98196 1134 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 COL28A1Q2UY09 1125 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 CT47A1Q5JQC4 288 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-210ENST00000472880 ERN2Q76MJ5 926 aaKnown RBP20.19■□□□□ 0.82
COL9A3-210ENST00000472880 ARCQ7LC44 396 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 KANSL1Q7Z3B3 1105 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 HORMAD1Q86X24 394 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 ZNF677Q86XU0 584 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 TMEM145Q8NBT3 493 aa20.19■□□□□ 0.82
COL9A3-210ENST00000472880 KLK6Q92876 244 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms