RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 BFARQ9NZS9 450 aa14.9□□□□□ -0.02
HIF3A-206ENST00000472815 SAMD15Q9P1V8 674 aa14.9□□□□□ -0.02
HIF3A-206ENST00000472815 SLC24A2Q9UI40 661 aa14.9□□□□□ -0.02
HIF3A-206ENST00000472815 SMIM23A6NLE4 172 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 A6NNZ2 444 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 H0Y626 953 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 CD68P34810 354 aaPredicted RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 MMP13P45452 471 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 OXCT1P55809 520 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 RPS24P62847 133 aaKnown RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 TNK2Q07912 1038 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 NR1H3Q13133 447 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 RFTN1Q14699 578 aaPredicted RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 LONRF1Q17RB8 773 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 LRIT3Q3SXY7 679 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 TUBB8Q3ZCM7 444 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 KCTD16Q68DU8 428 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 FAM217AQ8IXS0 508 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 CMTM8Q8IZV2 173 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 SHKBP1Q8TBC3 707 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 ZSCAN18Q8TBC5 510 aaPredicted RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 EPS8L3Q8TE67 593 aaKnown RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 ARHGEF2Q92974 986 aaKnown RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 CYTH2Q99418 400 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 EBNA1BP2Q99848 306 aaKnown RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 PIDD1Q9HB75 910 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 VPS45Q9NRW7 570 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 CFAP97Q9P2B7 532 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 TBC1D30Q9Y2I9 924 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 YBX2Q9Y2T7 364 aaKnown RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 HCFC2Q9Y5Z7 792 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 MAD1L1Q9Y6D9 718 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 IKBKGQ9Y6K9 419 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 E2F8A0AVK6 867 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 F5H423 210 aaPredicted RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 TRDMT1O14717 391 aaKnown RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 PRAMEF11O60813 436 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 AVILO75366 819 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 BANF1O75531 89 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 CYBBP04839 570 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 PBX2P40425 430 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 GEMIN4P57678 1058 aaKnown RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 CDH17Q12864 832 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 MPP3Q13368 585 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 ZNF235Q14590 738 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 MPPE1Q53F39 396 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 MPP7Q5T2T1 576 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 KCTD11Q693B1 232 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 CASC4Q6P4E1 433 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 ZNF534Q76KX8 674 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 SPRED2Q7Z698 418 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 TDRPQ86YL5 185 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 CNTD1Q8N815 330 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 STAMBPL1Q96FJ0 436 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 FSD1LQ9BXM9 530 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 SLC46A2Q9BY10 475 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 MUC3BQ9H195 1237 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 SLC25A51Q9H1U9 297 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 ACSS3Q9H6R3 686 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 HCFC1R1Q9NWW0 138 aa14.89□□□□□ -0.03
HIF3A-206ENST00000472815 DNMT3BQ9UBC3 853 aaKnown RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 NOVA2Q9UNW9 492 aaKnown RBP14.89□□□□□ -0.03
HIF3A-206ENST00000472815 CHD9Q3L8U1 2897 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 CCDC195A0A1B0GUA6 201 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 MAGEB16A2A368 324 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 LEFTY2O00292 366 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 TSPAN3O60637 253 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 TBL1XO60907 577 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 HLA-DQB2P05538 268 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 NR1D1P20393 614 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 SSTR1P30872 391 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 SLCO1A2P46721 670 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 NPY2RP49146 381 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 ITKQ08881 620 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 CDH18Q13634 790 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 LBRQ14739 615 aaKnown RBP14.88□□□□□ -0.03
HIF3A-206ENST00000472815 RASA2Q15283 850 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 ARMC3Q5W041 872 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 CAPN12Q6ZSI9 719 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 RBM23Q86U06 439 aaKnown RBP14.88□□□□□ -0.03
HIF3A-206ENST00000472815 KLHDC8BQ8IXV7 354 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 TEX26Q8N6G2 289 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 ZNF557Q8N988 423 aaPredicted RBP14.88□□□□□ -0.03
HIF3A-206ENST00000472815 TTC16Q8NEE8 873 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 GSDMBQ8TAX9 411 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 ARNTL2Q8WYA1 636 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 CFAP36Q96G28 342 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 SIGLEC10Q96LC7 697 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 NKX2-4Q9H2Z4 354 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 ATP13A1Q9HD20 1204 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 NT5MQ9NPB1 228 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 DZANK1Q9NVP4 752 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 CHD7Q9P2D1 2997 aa14.88□□□□□ -0.03
HIF3A-206ENST00000472815 J3KR12 359 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 PER2O15055 1255 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 KDELR3O43731 214 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 LUC7L3O95232 432 aaKnown RBP14.87□□□□□ -0.03
HIF3A-206ENST00000472815 GJA1P17302 382 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 PGAM1P18669 254 aa14.87□□□□□ -0.03
HIF3A-206ENST00000472815 GPX6P59796 221 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms