RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 SMARCB1Q12824 385 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 CDH17Q12864 832 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 MTM1Q13496 603 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 KRT72Q14CN4 511 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 UGP2Q16851 508 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 SPRED3Q2MJR0 410 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 CCDC153Q494R4 210 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 MROH9Q5TGP6 573 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 FAM91A1Q658Y4 838 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 GPRIN1Q7Z2K8 1008 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 TAC4Q86UU9 113 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 WDR75Q8IWA0 830 aaKnown RBP7.79□□□□□ -1.16
CCDC171-205ENST00000472806 MPP5Q8N3R9 675 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 ZNF276Q8N554 614 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 ATPAF2Q8N5M1 289 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 C3orf58Q8NDZ4 430 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 STKLD1Q8NE28 680 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 CFAP61Q8NHU2 1237 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 PPP4R1Q8TF05 950 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 SH3TC2Q8TF17 1288 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 OXNAD1Q96HP4 312 aaPredicted RBP7.79□□□□□ -1.16
CCDC171-205ENST00000472806 TEKT5Q96M29 485 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 GLT1D1Q96MS3 346 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 KCNK16Q96T55 309 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 PKMYT1Q99640 499 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 OXCT2Q9BYC2 517 aaPredicted RBP7.79□□□□□ -1.16
CCDC171-205ENST00000472806 SLC13A1Q9BZW2 595 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.79□□□□□ -1.16
CCDC171-205ENST00000472806 TRPV6Q9H1D0 765 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 SMOC2Q9H3U7 446 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 AGO3Q9H9G7 860 aaKnown RBP7.79□□□□□ -1.16
CCDC171-205ENST00000472806 NOD2Q9HC29 1040 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 NMRK2Q9NPI5 230 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 ENAMQ9NRM1 1142 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 OLA1Q9NTK5 396 aaKnown RBP7.79□□□□□ -1.16
CCDC171-205ENST00000472806 PCMTD2Q9NV79 361 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 THAP1Q9NVV9 213 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 COMMD8Q9NX08 183 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 SIRPGQ9P1W8 387 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 BAIAP2L1Q9UHR4 511 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 LNPEPQ9UIQ6 1025 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 GABRQQ9UN88 632 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 SORCS3Q9UPU3 1222 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 CHKBQ9Y259 395 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 INPP5FQ9Y2H2 1132 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 RPS6KL1Q9Y6S9 549 aa7.79□□□□□ -1.16
CCDC171-205ENST00000472806 TSC2P49815 1807 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 A0A0G2JND7 137 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 MEIS3P2A8K0S8 358 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 WASH4PA8MWX3 477 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 SYN3O14994 580 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 MGEA5O60502 916 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 LRIG2O94898 1065 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 GNRH1P01148 92 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 ITGA2BP08514 1039 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 PAMP19021 973 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 CALB2P22676 271 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 PTPN4P29074 926 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 TYK2P29597 1187 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 MAGEA11P43364 429 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 BRCC3P46736 316 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 HK2P52789 917 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 SLC5A3P53794 718 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 PRKCZQ05513 592 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 STX3Q13277 289 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 BMPR2Q13873 1038 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 UBAP2LQ14157 1087 aaKnown RBP7.78□□□□□ -1.16
CCDC171-205ENST00000472806 ARHGEF6Q15052 776 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 CHI3L2Q15782 390 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 TRIM71Q2Q1W2 868 aaKnown RBP7.78□□□□□ -1.16
CCDC171-205ENST00000472806 TAF1BQ53T94 588 aaPredicted RBP7.78□□□□□ -1.16
CCDC171-205ENST00000472806 NOMO2Q5JPE7 1267 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 PDPK2PQ6A1A2 396 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 CCSAPQ6IQ19 270 aaPredicted RBP7.78□□□□□ -1.16
CCDC171-205ENST00000472806 RWDD4Q6NW29 188 aaKnown RBP7.78□□□□□ -1.16
CCDC171-205ENST00000472806 TRMT10BQ6PF06 316 aaKnown RBP7.78□□□□□ -1.16
CCDC171-205ENST00000472806 SLC24A5Q71RS6 500 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 BHLHA9Q7RTU4 235 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 CYP2U1Q7Z449 544 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 TMEM135Q86UB9 458 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 MON1AQ86VX9 555 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 OR52K1Q8NGK4 314 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 NSMCE1Q8WV22 266 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 EDEM1Q92611 657 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 FATE1Q969F0 183 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 ZNF669Q96BR6 464 aaPredicted RBP7.78□□□□□ -1.16
CCDC171-205ENST00000472806 NSL1Q96IY1 281 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 C8orf48Q96LL4 319 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 C1orf74Q96LT6 269 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 ANKRD27Q96NW4 1050 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 FCRL5Q96RD9 977 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 RTP3Q9BQQ7 232 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 TMEM120AQ9BXJ8 343 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 ZCWPW1Q9H0M4 648 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 PLAC1Q9HBJ0 212 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 MRM3Q9HC36 420 aaKnown RBP7.78□□□□□ -1.16
CCDC171-205ENST00000472806 SMYD2Q9NRG4 433 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 TBC1D13Q9NVG8 400 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 SYBUQ9NX95 663 aa7.78□□□□□ -1.16
CCDC171-205ENST00000472806 HEY2Q9UBP5 337 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms