RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 OSGEPQ9NPF4 335 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TMCO1Q9UM00 188 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TRBV23OR9-2A0A075B6M9 112 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MED24O75448 989 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 GYPCP04921 128 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 IFNGR2P38484 337 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ABRAXAS1Q6UWZ7 409 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MCEMP1Q8IX19 187 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ZNF248Q8NDW4 579 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 OPTCQ9UBM4 332 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TLL1O43897 1013 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CCND1P24385 295 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CD151P48509 253 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CRY1Q16526 586 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PFKFB4Q16877 469 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ATXN2Q99700 1313 aaKnown RBP13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FAM228BP0C875 321 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FASP25445 335 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TGFBR2P37173 567 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 NFIAQ12857 509 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SLC30A10Q6XR72 485 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SLC2A14Q8TDB8 520 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 GPR152Q8TDT2 470 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 EMID1Q96A84 441 aaPredicted RBP13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FERD3LQ96RJ6 166 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 GAD1Q99259 594 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PAFAH2Q99487 392 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TMA7Q9Y2S6 64 aaKnown RBP13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 NDUFAF1Q9Y375 327 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 A0A1B0GTH6 734 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MEA1Q16626 185 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RIMKLBQ9ULI2 386 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TMEM253P0C7T8 217 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PTPN11Q06124 597 aaPredicted RBP13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 POU5F2Q8N7G0 328 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SGCDQ92629 289 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PHF11Q9UIL8 331 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CRB1P82279 1406 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TBC1D3DA0A087WVF3 549 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TBC1D3IA0A087WXS9 549 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TBC1D3EA0A087X179 549 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TBC1D3KA0A087X1G2 549 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TBC1D3FA6NER0 549 aaPredicted RBP13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TBC1D3LB9A6J9 549 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ADM5C9JUS6 153 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TBC1D3HP0C7X1 549 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RPL19P84098 196 aaKnown RBP13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MFSD10Q14728 455 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TBC1D3GQ6DHY5 549 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TBC1D3CQ6IPX1 549 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TBC1D3Q8IZP1 549 aaPredicted RBP13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RAD51AP1Q96B01 352 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ARHGAP9Q9BRR9 750 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 UBA2Q9UBT2 640 aaPredicted RBP13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DMGDHQ9UI17 866 aaKnown RBP13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SLC27A5Q9Y2P5 690 aa13.42□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TRAV19A0A0A6YYK7 116 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TSPAN8P19075 237 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PLA2G4EQ3MJ16 856 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 STYK1Q6J9G0 422 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 LRRC34Q8IZ02 419 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ZNF655Q8N720 491 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 OR5T3Q8NGG3 340 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TAS1R2Q8TE23 839 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 HIC2Q96JB3 615 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 BDH2Q9BUT1 245 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ROPN1BQ9BZX4 212 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SEMA6AQ9H2E6 1030 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ROPN1Q9HAT0 212 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MAGEB3O15480 346 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RTN3O95197 1032 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CCT3P49368 545 aaKnown RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RFT1Q96AA3 541 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RGS10O43665 173 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ERAL1O75616 437 aaKnown RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DBIP07108 87 aaKnown RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 HDCP19113 662 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MAPK7Q13164 816 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FAM220AQ7Z4H9 259 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SELENOMQ8WWX9 145 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MARCH2Q9P0N8 246 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ARHGEF17Q96PE2 2063 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 LIN7AO14910 233 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TSPAN1O60635 241 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 NTSP30990 170 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 HERVK_113P62684 666 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ELOAQ14241 798 aaKnown RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ARMC3Q5W041 872 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 REXO1L1PQ8IX06 675 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PEX5LQ8IYB4 626 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 NOA1Q8NC60 698 aaKnown RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PPP1R16AQ96I34 528 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 AIF1LQ9BQI0 150 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 KLHL4Q9C0H6 718 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CMTM6Q9NX76 183 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ARIH1Q9Y4X5 557 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MAGI2Q86UL8 1455 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PIRTP0C851 137 aa13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 KRR1Q13601 381 aaKnown RBP13.41□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 AGBL2Q5U5Z8 902 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms