RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 APOBEC4Q8WW27 367 aaKnown RBP3.87□□□□□ -1.79
LRCH3-213ENST00000471667 SIPA1Q96FS4 1042 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 ATXN7L3BQ96GX2 97 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 PRR11Q96HE9 360 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-213ENST00000471667 MRGPRX1Q96LB2 322 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 CCDC140Q96MF4 163 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 WWC2-AS2Q96NR7 200 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 PGLYRP2Q96PD5 576 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 HAPLN3Q96S86 360 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 SEPT5Q99719 369 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-213ENST00000471667 ZNF577Q9BSK1 485 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 OSBPL2Q9H1P3 480 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 IFT122Q9HBG6 1241 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 BARX1Q9HBU1 254 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-213ENST00000471667 TRPC7Q9HCX4 862 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 CHST11Q9NPF2 352 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 ITM2CQ9NQX7 267 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 AASDHPPTQ9NRN7 309 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 SLC38A7Q9NVC3 462 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 NCKIPSDQ9NZQ3 722 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 DEC1Q9P2X7 70 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 HSFX1Q9UBD0 423 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 MYOTQ9UBF9 498 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 CACNG4Q9UBN1 327 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 ERRFI1Q9UJM3 462 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-213ENST00000471667 PCDHA6Q9UN73 950 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 ZDHHC9Q9Y397 364 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 TCAF1Q9Y4C2 921 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 CCDC168Q8NDH2 2452 aa3.87□□□□□ -1.79
LRCH3-213ENST00000471667 BOD1L1Q8NFC6 3051 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 DOCK5Q9H7D0 1870 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 ATRQ13535 2644 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 PLXND1Q9Y4D7 1925 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 ERICH2A1L162 156 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 FAM171A2A8MVW0 826 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 I3L4J1 428 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 MEIS2O14770 477 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 PLD2O14939 933 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 NPC1O15118 1278 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 TSPAN1O60635 241 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 DKC1O60832 514 aaKnown RBP eCLIP3.86□□□□□ -1.79
LRCH3-213ENST00000471667 RAB11FIP3O75154 756 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 HMMRO75330 724 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 FOSP01100 380 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-213ENST00000471667 BPIP17213 487 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 SFNP31947 248 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 BRCC3P46736 316 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 TPMTP51580 245 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 CLCNKBP51801 687 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 JAK3P52333 1124 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 GAD2Q05329 585 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 ZNF77Q15935 545 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 UPP1Q16831 310 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 VWA2Q5GFL6 755 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 XKR3Q5GH77 459 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 TXNDC8Q6A555 127 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 DENND5AQ6IQ26 1287 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 C6orf15Q6UXA7 325 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-213ENST00000471667 ASB18Q6ZVZ8 466 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 NIPA1Q7RTP0 329 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 VASH2Q86V25 355 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 PLA2G4DQ86XP0 818 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 RAB11FIP4Q86YS3 637 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 CCDC83Q8IWF9 413 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 FBXO39Q8N4B4 442 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 KIAA1958Q8N8K9 716 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 RNF149Q8NC42 400 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 CHTF18Q8WVB6 975 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 PIBF1Q8WXW3 757 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 CPB2Q96IY4 423 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 MENTQ9BUN1 341 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 EFHD1Q9BUP0 239 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 BTBD1Q9H0C5 482 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 MEGF9Q9H1U4 602 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 EPB41L1Q9H4G0 881 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 RIOX1Q9H6W3 641 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 ZDHHC4Q9NPG8 344 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 RBM28Q9NW13 759 aaKnown RBP3.86□□□□□ -1.79
LRCH3-213ENST00000471667 USP36Q9P275 1121 aaKnown RBP3.86□□□□□ -1.79
LRCH3-213ENST00000471667 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-213ENST00000471667 NIPBLQ6KC79 2804 aaeCLIP3.86□□□□□ -1.79
LRCH3-213ENST00000471667 ARHGEF17Q96PE2 2063 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-213ENST00000471667 MN1Q10571 1320 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-213ENST00000471667 CELSR1Q9NYQ6 3014 aa3.86□□□□□ -1.79
LRCH3-213ENST00000471667 NUP210Q8TEM1 1887 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-213ENST00000471667 A0A0B4J269 797 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 IGKV6-21A0A0C4DH24 114 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 A0A1W2PQF6 199 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 FRMD3A2A2Y4 597 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 NEMP2A6NFY4 417 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 RNF212BA8MTL3 300 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 PODXLO00592 558 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 TBX3O15119 743 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 MUSKO15146 869 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 LRCH4O75427 683 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 SEMA4FO95754 770 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 CSH1P0DML2 217 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 CSH2P0DML3 217 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 CKMT1AP12532 417 aa3.85□□□□□ -1.79
LRCH3-213ENST00000471667 CD38P28907 300 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms