RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 CFAP65Q6ZU64 1925 aaKnown RBP6.08□□□□□ -1.44
CCDC39-202ENST00000471307 A0A087WV62 115 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 SYT5O00445 386 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 SLC16A2P36021 539 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 RCAN1P53805 252 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 OAZ1P54368 228 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 ZXDBP98169 803 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 ROR2Q01974 943 aaKnown RBP6.08□□□□□ -1.44
CCDC39-202ENST00000471307 RHAGQ02094 409 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 BTBD16Q32M84 506 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 ZACNQ401N2 412 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 MAP9Q49MG5 647 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 TOGARAM2Q6ZUX3 1019 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 ANKS1BQ7Z6G8 1248 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 FBXL14Q8N1E6 418 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 SLC2A12Q8TD20 617 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 CLEC4CQ8WTT0 213 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 WASF1Q92558 559 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 ISCUQ9H1K1 167 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 OBP2BQ9NPH6 170 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 HIF1ANQ9NWT6 349 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 PKP3Q9Y446 797 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 SLC4A4Q9Y6R1 1079 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 PLA2R1Q13018 1463 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 CCDC144AA2RUR9 1427 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 NPATQ14207 1427 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 TONSLQ96HA7 1378 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 CAMSAP1Q5T5Y3 1602 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 EME2A4GXA9 379 aaPredicted RBP6.07□□□□□ -1.44
CCDC39-202ENST00000471307 LGALS16A8MUM7 142 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 TNFRSF6BO95407 300 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 SETSIPP0DME0 302 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 HOXB9P17482 250 aaPredicted RBP6.07□□□□□ -1.44
CCDC39-202ENST00000471307 HTR3AP46098 478 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 TNFAIP2Q03169 654 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 PFKFB4Q16877 469 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 ENTPD8Q5MY95 495 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 IQCF1Q8N6M8 205 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 C7orf57Q8NEG2 295 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 IP6K1Q92551 441 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 ZNF479Q96JC4 524 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 MEIS3Q99687 375 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 WDR12Q9GZL7 423 aaKnown RBP6.07□□□□□ -1.44
CCDC39-202ENST00000471307 MYLK2Q9H1R3 596 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 KRCC1Q9NPI7 259 aaPredicted RBP6.07□□□□□ -1.44
CCDC39-202ENST00000471307 WNT16Q9UBV4 365 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 C19orf53Q9UNZ5 99 aaPredicted RBP6.07□□□□□ -1.44
CCDC39-202ENST00000471307 NOS1P29475 1434 aa6.07□□□□□ -1.44
CCDC39-202ENST00000471307 CKAP5Q14008 2032 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 SPHKAPQ2M3C7 1700 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 HLA-DQA2P01906 255 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 NGFRP08138 427 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 PEPDP12955 493 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 EGR4Q05215 589 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 WASHC2DQ5SRD0 308 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 AAGABQ6PD74 315 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 TMEM200AQ86VY9 491 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 GPSM1Q86YR5 675 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 CAMK1DQ8IU85 385 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 SLC44A2Q8IWA5 706 aaPredicted RBP6.06□□□□□ -1.44
CCDC39-202ENST00000471307 GABPB2Q8TAK5 448 aaPredicted RBP6.06□□□□□ -1.44
CCDC39-202ENST00000471307 BICD2Q8TD16 824 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 CPT1BQ92523 772 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 MIB2Q96AX9 1013 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 ZNF419Q96HQ0 510 aaPredicted RBP6.06□□□□□ -1.44
CCDC39-202ENST00000471307 PDE11AQ9HCR9 933 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 PRDM8Q9NQV8 689 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 TMLHEQ9NVH6 421 aa6.06□□□□□ -1.44
CCDC39-202ENST00000471307 CLTCQ00610 1675 aaKnown RBP6.06□□□□□ -1.44
CCDC39-202ENST00000471307 TRPM2O94759 1503 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 MROH2AA6NES4 1674 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 TRBV5-7A0A0A0MS05 114 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 ACTL6BO94805 426 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 MLH1P40692 756 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 AP2B1P63010 937 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 HDAC1Q13547 482 aaPredicted RBP6.05□□□□□ -1.44
CCDC39-202ENST00000471307 PLK5Q496M5 336 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 ARL13AQ5H913 290 aaPredicted RBP6.05□□□□□ -1.44
CCDC39-202ENST00000471307 TTC22Q5TAA0 569 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 MORC1Q86VD1 984 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 OR1N1Q8NGS0 311 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 PLAC1Q9HBJ0 212 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 ARL15Q9NXU5 204 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 NDUFAF4Q9P032 175 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 DAPP1Q9UN19 280 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 LZTS1Q9Y250 596 aa6.05□□□□□ -1.44
CCDC39-202ENST00000471307 RPGRIP1LQ68CZ1 1315 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 CNTNAP2Q9UHC6 1331 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.04□□□□□ -1.44
CCDC39-202ENST00000471307 TMEM247A6NEH6 219 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 AGAP5A6NIR3 686 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 HNRNPRO43390 633 aaKnown RBP6.04□□□□□ -1.44
CCDC39-202ENST00000471307 SLC28A2O43868 658 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 HOXC6P09630 235 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 TGFB3P10600 412 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 ARSBP15848 533 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 PDIA3P30101 505 aaKnown RBP6.04□□□□□ -1.44
CCDC39-202ENST00000471307 SERPINF1P36955 418 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 ICA1Q05084 483 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 IDI1Q13907 227 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms