RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 STRADAQ7RTN6 431 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 OR14C36Q8NHC7 312 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 SLC20A1Q8WUM9 679 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 CDC6Q99741 560 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 SCNM1Q9BWG6 230 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 ACE2Q9BYF1 805 aaPredicted RBP13.83□□□□□ -0.2
HMGN1-211ENST00000471260 ZYG11BQ9C0D3 744 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 IL21RQ9HBE5 538 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 METTL5Q9NRN9 209 aaKnown RBP13.83□□□□□ -0.2
HMGN1-211ENST00000471260 PCOLCE2Q9UKZ9 415 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 FNDC3AQ9Y2H6 1198 aaKnown RBP13.83□□□□□ -0.2
HMGN1-211ENST00000471260 NEUROG3Q9Y4Z2 214 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 SNX11Q9Y5W9 270 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 SLCO1B1Q9Y6L6 691 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 CABIN1Q9Y6J0 2220 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 TBC1D3DA0A087WVF3 549 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 TBC1D3IA0A087WXS9 549 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 TBC1D3EA0A087X179 549 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 TBC1D3KA0A087X1G2 549 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 TBC1D3FA6NER0 549 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-211ENST00000471260 TBC1D3LB9A6J9 549 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 LATO43561 262 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 PCDHGA12O60330 932 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 SRGAP2O75044 1071 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 CALB1P05937 261 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 PROS1P07225 676 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 TBC1D3HP0C7X1 549 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 SRCP12931 536 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 VAV1P15498 845 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 ADRA1BP35368 520 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 ETFBP38117 255 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 CTSKP43235 329 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 C21orf59P57076 290 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 CCDC14Q49A88 953 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 SLC45A4Q5BKX6 768 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 TBC1D3GQ6DHY5 549 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 TBC1D3CQ6IPX1 549 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-211ENST00000471260 APTXQ7Z2E3 356 aaKnown RBP13.82□□□□□ -0.2
HMGN1-211ENST00000471260 FAM131BQ86XD5 332 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 PHF13Q86YI8 300 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-211ENST00000471260 TBC1D3Q8IZP1 549 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-211ENST00000471260 ATP11CQ8NB49 1132 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 PIP4K2CQ8TBX8 421 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 RXFP2Q8WXD0 754 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 CENPIQ92674 756 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-211ENST00000471260 C16orf45Q96MC5 204 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-211ENST00000471260 PSMB7Q99436 277 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 C11orf70Q9BRQ4 267 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 OSBPL2Q9H1P3 480 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 ADAM22Q9P0K1 906 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 ZNF212Q9UDV6 495 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 VPS51Q9UID3 782 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 APOBEC2Q9Y235 224 aaKnown RBP13.82□□□□□ -0.2
HMGN1-211ENST00000471260 MSRB2Q9Y3D2 182 aa13.82□□□□□ -0.2
HMGN1-211ENST00000471260 A0A0D9SEW6 157 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 TMEM8BA6NDV4 472 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 C2CD4BA6NLJ0 364 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 PLRG1O43660 514 aaKnown RBP13.81□□□□□ -0.2
HMGN1-211ENST00000471260 MAGEC1O60732 1142 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 KRT3P12035 628 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 CD38P28907 300 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 CCT8P50990 548 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 FAM193AP78312 1265 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 ATP11AP98196 1134 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 PTP4A2Q12974 167 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 CLEC16AQ2KHT3 1053 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 ARTNQ5T4W7 220 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 RETSATQ6NUM9 610 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 PPP1R2P3Q6NXS1 205 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 NEK5Q6P3R8 708 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 UNQ6494/PRO21346Q6UXR6 183 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 Q6ZVU0 165 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 PRPF39Q86UA1 669 aaKnown RBP13.81□□□□□ -0.2
HMGN1-211ENST00000471260 EMC1Q8N766 993 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 C3orf20Q8ND61 904 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 TMIEQ8NEW7 156 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 SLC30A5Q8TAD4 765 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 SETD7Q8WTS6 366 aaKnown RBP13.81□□□□□ -0.2
HMGN1-211ENST00000471260 ADAMTS14Q8WXS8 1223 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 CAMK1GQ96NX5 476 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 SELENOOQ9BVL4 669 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 XPO4Q9C0E2 1151 aaKnown RBP13.81□□□□□ -0.2
HMGN1-211ENST00000471260 CEP44Q9C0F1 390 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 HSD3B7Q9H2F3 369 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 MPP6Q9NZW5 540 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 OR12D3Q9UGF7 316 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 SARDHQ9UL12 918 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 MYO6Q9UM54 1294 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 DMTF1Q9Y222 760 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 DOCK4Q8N1I0 1966 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 CACNA1BQ00975 2339 aa13.81□□□□□ -0.2
HMGN1-211ENST00000471260 NYNRINQ9P2P1 1898 aaKnown RBP13.8□□□□□ -0.2
HMGN1-211ENST00000471260 GOLGA6L9A6NEM1 432 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 SIGLEC16A6NMB1 481 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 YKT6O15498 198 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 HYAL3O43820 417 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-211ENST00000471260 MT-CO1P00395 513 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 PRNPP04156 253 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 FERP16591 822 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms