RNA–Protein interactions for RNA: ENST00000471134.1

TRA2B-210, Transcript of transformer 2 beta homolog, human

TSL 5

Gene TRA2B, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-210	ENST00000471134	ARNT2	Q9HBZ2	717 aa		4.98	□□□□□ -1.61
TRA2B-210	ENST00000471134	DONSON	Q9NYP3	566 aa		4.98	□□□□□ -1.61
TRA2B-210	ENST00000471134	NFU1	Q9UMS0	254 aa		4.98	□□□□□ -1.61
TRA2B-210	ENST00000471134	PCDHGB2	Q9Y5G2	931 aa		4.98	□□□□□ -1.61
TRA2B-210	ENST00000471134	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	RASA4B	C9J798	803 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	HNRNPDL	O14979	420 aa	Known RBP	4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	RASA4	O43374	803 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	CAND2	O75155	1236 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	CLDN7	O95471	211 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	SP1	P08047	785 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	NAGA	P17050	411 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	TYK2	P29597	1187 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	TM4SF4	P48230	202 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	POU3F1	Q03052	451 aa	Predicted RBP	4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	SAFB	Q15424	915 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	RNF144B	Q7Z419	303 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	DPP9	Q86TI2	863 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	SLC35F5	Q8WV83	523 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	HES6	Q96HZ4	224 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	IGSF21	Q96ID5	467 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	CCDC136	Q96JN2	1154 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	TCF7L2	Q9NQB0	619 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	IL36RN	Q9UBH0	155 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	SLC39A10	Q9ULF5	831 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	CNTN6	Q9UQ52	1028 aa		4.97	□□□□□ -1.61
TRA2B-210	ENST00000471134	IGHV4-28	A0A0C4DH34	117 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	FAM90A18P	A6NE21	464 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	FAM90A16P	A6NEW6	464 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	FAM90A9P	A6NNJ1	464 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	FAM90A5P	A8MXJ8	464 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	BMPR1B	O00238	502 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	PLA2G6	O60733	806 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	TMCC1	O94876	653 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	HEXIM1	O94992	359 aa	Known RBP	4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	F7	P08709	466 aa	Predicted RBP	4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	FAM90A15P	P0C7V4	464 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	FAM90A14P	P0C7W9	464 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	RCAN1	P53805	252 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	CDH12	P55289	794 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	SYTL3	Q4VX76	610 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	ZNF569	Q5MCW4	686 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	KSR2	Q6VAB6	950 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	NRSN1	Q8IZ57	195 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	TCP11L2	Q8N4U5	519 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	OR2C3	Q8N628	320 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	ENDOV	Q8N8Q3	282 aa	Known RBP	4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	SLC39A13	Q96H72	371 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	NPAS1	Q99742	590 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	STK33	Q9BYT3	514 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	TP63	Q9H3D4	680 aa	Predicted RBP	4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	GAREM1	Q9H706	876 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	CEP83	Q9Y592	693 aa		4.96	□□□□□ -1.62
TRA2B-210	ENST00000471134	PRR23A	A6NEV1	266 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	HSPB6	O14558	160 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	ASNA1	O43681	348 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	MYZAP	P0CAP1	466 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	HOXB9	P17482	250 aa	Predicted RBP	4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	DDR1	Q08345	913 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	C5orf22	Q49AR2	442 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	IZUMO3	Q5VZ72	239 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	RETSAT	Q6NUM9	610 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	TRIM74	Q86UV6	250 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	TRIM73	Q86UV7	250 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	KIAA1191	Q96A73	305 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	PRPF18	Q99633	342 aa	Known RBP	4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	CDH22	Q9UJ99	828 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	AGO1	Q9UL18	857 aa	Known RBP	4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	PCDHA10	Q9Y5I2	948 aa		4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	SRPRB	Q9Y5M8	271 aa	Known RBP	4.95	□□□□□ -1.62
TRA2B-210	ENST00000471134	LARGE1	O95461	756 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	KRT18	P05783	430 aa	Known RBP	4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	PRKCH	P24723	683 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	MYBPC2	Q14324	1141 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	TRIM60	Q495X7	471 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	MTFR2	Q6P444	385 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	OR1N1	Q8NGS0	311 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	SPATA20	Q8TB22	786 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	TMEM163	Q8TC26	289 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	HMGB4	Q8WW32	186 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	ZNF333	Q96JL9	665 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	SLC25A33	Q9BSK2	321 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	SLC22A11	Q9NSA0	550 aa		4.94	□□□□□ -1.62
TRA2B-210	ENST00000471134	PEX14	O75381	377 aa		4.93	□□□□□ -1.62
TRA2B-210	ENST00000471134	RBM39	Q14498	530 aa	Known RBP	4.93	□□□□□ -1.62
TRA2B-210	ENST00000471134	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
TRA2B-210	ENST00000471134	LONRF1	Q17RB8	773 aa		4.93	□□□□□ -1.62
TRA2B-210	ENST00000471134	SYCP2L	Q5T4T6	812 aa		4.93	□□□□□ -1.62
TRA2B-210	ENST00000471134	ZNF449	Q6P9G9	518 aa		4.93	□□□□□ -1.62
TRA2B-210	ENST00000471134	SMIM29	Q86T20	159 aa		4.93	□□□□□ -1.62
TRA2B-210	ENST00000471134	VPS52	Q8N1B4	723 aa		4.93	□□□□□ -1.62
TRA2B-210	ENST00000471134	ADGRG7	Q96K78	797 aa		4.93	□□□□□ -1.62
TRA2B-210	ENST00000471134	GFM1	Q96RP9	751 aa	Known RBP	4.93	□□□□□ -1.62
TRA2B-210	ENST00000471134	CERS4	Q9HA82	394 aa		4.93	□□□□□ -1.62
TRA2B-210	ENST00000471134	NPIPB13	A6NJU9	1138 aa		4.92	□□□□□ -1.62
TRA2B-210	ENST00000471134	AQP12B	A6NM10	295 aa		4.92	□□□□□ -1.62
TRA2B-210	ENST00000471134	NPIPB5	A8MRT5	1133 aa		4.92	□□□□□ -1.62
TRA2B-210	ENST00000471134	NPIPB4	C9JG80	1138 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms