RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 RETREG1Q9H6L5 497 aa16.06■□□□□ 0.16
HDAC6-218ENST00000470942 NDFIP2Q9NV92 336 aa16.06■□□□□ 0.16
HDAC6-218ENST00000470942 TMEM248Q9NWD8 314 aa16.06■□□□□ 0.16
HDAC6-218ENST00000470942 FZD4Q9ULV1 537 aa16.06■□□□□ 0.16
HDAC6-218ENST00000470942 FZD10Q9ULW2 581 aa16.06■□□□□ 0.16
HDAC6-218ENST00000470942 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-218ENST00000470942 CACNA1EQ15878 2313 aa16.06■□□□□ 0.16
HDAC6-218ENST00000470942 ASCC3Q8N3C0 2202 aaKnown RBP16.06■□□□□ 0.16
HDAC6-218ENST00000470942 CHD5Q8TDI0 1954 aa16.06■□□□□ 0.16
HDAC6-218ENST00000470942 TMEM191CA6NGB0 347 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 C1QTNF3-AMACRE9PGA6 284 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 PLK4O00444 970 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 MCF2LO15068 1137 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 ALOX15BO15296 676 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 CBFA2T2O43439 604 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 CREB3O43889 395 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 SERPING1P05155 500 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 CASP14P31944 242 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 L1CAMP32004 1257 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 ACVRL1P37023 503 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 ETFBP38117 255 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 CLCN6P51797 869 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 GALCP54803 685 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 AIF1P55008 147 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 SLC20A2Q08357 652 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 POM121L1PQ3SYA9 428 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 KIAA0895LQ68EN5 471 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 NCEH1Q6PIU2 408 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 NLRP14Q86W24 1093 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 ZNF354CQ86Y25 554 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 MINDY1Q8N5J2 469 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 RNF214Q8ND24 703 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 OR14C36Q8NHC7 312 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 PIP4K2CQ8TBX8 421 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 BIRC7Q96CA5 298 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 EPAS1Q99814 870 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 ADAMTS1Q9UHI8 967 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 SARDHQ9UL12 918 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.05■□□□□ 0.16
HDAC6-218ENST00000470942 SCINQ9Y6U3 715 aa16.05■□□□□ 0.16
HDAC6-218ENST00000470942 PLXNA2O75051 1894 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 OPHN1O60890 802 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 RAMP2O60895 175 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 ZMPSTE24O75844 475 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 RNF8O76064 485 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 GYPCP04921 128 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 MYBL1P10243 752 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 EPHB2P29323 1055 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 RECQLP46063 649 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-218ENST00000470942 DNA2P51530 1060 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 METAP1P53582 386 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 POLD3Q15054 466 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-218ENST00000470942 NFKBIBQ15653 356 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 C22orf39Q6P5X5 142 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 OR2I1PQ8NGU4 316 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 OR2T34Q8NGX1 318 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 ARHGEF2Q92974 986 aaKnown RBP16.04■□□□□ 0.16
HDAC6-218ENST00000470942 ACE2Q9BYF1 805 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-218ENST00000470942 ISCUQ9H1K1 167 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 MAGEH1Q9H213 219 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 TNKS2Q9H2K2 1166 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 MRPL47Q9HD33 250 aaKnown RBP16.04■□□□□ 0.16
HDAC6-218ENST00000470942 GPATCH2LQ9NWQ4 482 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 PCSK1NQ9UHG2 260 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 PPM1HQ9ULR3 514 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 HPCAL4Q9UM19 191 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 NEU3Q9UQ49 428 aa16.04■□□□□ 0.16
HDAC6-218ENST00000470942 TBC1D3DA0A087WVF3 549 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 TBC1D3IA0A087WXS9 549 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 TBC1D3EA0A087X179 549 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 TBC1D3KA0A087X1G2 549 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 TBC1D3FA6NER0 549 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-218ENST00000470942 TBC1D3LB9A6J9 549 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 KCNK5O95279 499 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 TBC1D3HP0C7X1 549 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 CD27P26842 260 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 CHRNA3P32297 505 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 DRD3P35462 400 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 CSNK1EP49674 416 aaKnown RBP16.03■□□□□ 0.16
HDAC6-218ENST00000470942 SERPINH1P50454 418 aaKnown RBP16.03■□□□□ 0.16
HDAC6-218ENST00000470942 ARF5P84085 180 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 CNTN1Q12860 1018 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 GRIK2Q13002 908 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 TBC1D3GQ6DHY5 549 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 TBC1D3CQ6IPX1 549 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 TBC1D3Q8IZP1 549 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-218ENST00000470942 RTL3Q8N8U3 475 aaKnown RBP16.03■□□□□ 0.16
HDAC6-218ENST00000470942 CHST14Q8NCH0 376 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 OR2A12Q8NGT7 310 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 C1orf216Q8TAB5 229 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 TRIM7Q9C029 511 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 ZDHHC5Q9C0B5 715 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 CATSPERBQ9H7T0 1116 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 AP4E1Q9UPM8 1137 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 FCF1Q9Y324 198 aaKnown RBP16.03■□□□□ 0.16
HDAC6-218ENST00000470942 ACTL7AQ9Y615 435 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 SLCO1B1Q9Y6L6 691 aa16.03■□□□□ 0.16
HDAC6-218ENST00000470942 A0A1B0GVT2 93 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 KPNA3O00505 521 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-218ENST00000470942 PRPSAP2O60256 369 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms