RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 ADAM17P78536 824 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TKFCQ3LXA3 575 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 ARL13AQ5H913 290 aaPredicted RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TBCELQ5QJ74 424 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 EEPD1Q7L9B9 569 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 ZBTB33Q86T24 672 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TTC30AQ86WT1 665 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 KIAA2013Q8IYS2 634 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 SLCO4A1Q96BD0 722 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 BEGAINQ9BUH8 593 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 CEP44Q9C0F1 390 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 FANCEQ9HB96 536 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 POLE4Q9NR33 117 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 SEPT10Q9P0V9 454 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 DYTNA2CJ06 578 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 CCDC78A2IDD5 438 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 PRORSD1PA6NEY8 169 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TK2O00142 265 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 DYNC1LI2O43237 492 aaPredicted RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 CLASP2O75122 1294 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 C8BP07358 591 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TFEBP19484 476 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 MATN1P21941 496 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 DCKP27707 260 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 OPRL1P41146 370 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 GRIA4P48058 902 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 NEK2P51955 445 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 MLLT10P55197 1068 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 NME5P56597 212 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 RPS3AP61247 264 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 OCA2Q04671 838 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 PRPSAP1Q14558 356 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TIGD2Q4W5G0 525 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 ZNF534Q76KX8 674 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 PIWIL3Q7Z3Z3 882 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 LDHDQ86WU2 507 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 ZNF420Q8TAQ5 688 aaPredicted RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 CLIP3Q96DZ5 547 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 RNF157Q96PX1 679 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TCF12Q99081 682 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 MUC3BQ9H195 1237 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 POLR3FQ9H1D9 316 aaPredicted RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 MRPL46Q9H2W6 279 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TASP1Q9H6P5 420 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 AGO4Q9HCK5 861 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 VTA1Q9NP79 307 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 ZDHHC2Q9UIJ5 367 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 ZNF229Q9UJW7 825 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 CPQQ9Y646 472 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TCAF2A6NFQ2 919 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 FAM47E-STBD1D6RA91 191 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 ZNF701M0R085 212 aaPredicted RBP9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 SNAP91O60641 907 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 CLPXO76031 633 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 ZBTB7AO95365 584 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 KRT19P08727 400 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 NCAM1P13591 858 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 PDGFRAP16234 1089 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 IDUAP35475 653 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 TFAMQ00059 246 aaKnown RBP9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 MERTKQ12866 999 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 SMUG1Q53HV7 270 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 APOBEC3HQ6NTF7 200 aaKnown RBP9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 GMCL1P1Q8NEA9 526 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 PDZD8Q8NEN9 1154 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 SMARCAD1Q9H4L7 1026 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 NOL6Q9H6R4 1146 aaKnown RBP9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 ZBTB26Q9HCK0 441 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 ASNSD1Q9NWL6 643 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 GTSE1Q9NYZ3 720 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 SCHIP1Q9P0W5 487 aaPredicted RBP9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 COL20A1Q9P218 1284 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 GABBR1Q9UBS5 961 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 SEPT3Q9UH03 358 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 V9GYQ6 96 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 KRT75O95678 551 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 SLC7A1P30825 629 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 ARPC4P59998 168 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 MTERF2Q49AM1 385 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 AGKQ53H12 422 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 TREML2Q5T2D2 321 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 STXBP5Q5T5C0 1151 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 NEPROQ6NW34 567 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 TAS1R3Q7RTX0 852 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 STRA8Q7Z7C7 330 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 DSG4Q86SJ6 1040 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 DHFR2Q86XF0 187 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 TMEM143Q96AN5 459 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 NMRAL1Q9HBL8 299 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 PALMDQ9NP74 551 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 MOCS1Q9NZB8 636 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 EGFL7Q9UHF1 273 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 CCPG1Q9ULG6 757 aa9.68□□□□□ -0.86
NHLRC3-203ENST00000470258 ZBBXA8MT70 800 aa9.67□□□□□ -0.86
NHLRC3-203ENST00000470258 NFIBO00712 420 aa9.67□□□□□ -0.86
NHLRC3-203ENST00000470258 MT-ND1P03886 318 aa9.67□□□□□ -0.86
NHLRC3-203ENST00000470258 TTKP33981 857 aa9.67□□□□□ -0.86
NHLRC3-203ENST00000470258 AVPR1AP37288 418 aa9.67□□□□□ -0.86
NHLRC3-203ENST00000470258 YWHAEP62258 255 aaKnown RBP9.67□□□□□ -0.86
NHLRC3-203ENST00000470258 GBE1Q04446 702 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms