RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 KLHDC7AQ5VTJ3 777 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 TMPRSS12Q86WS5 348 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 XYLT1Q86Y38 959 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 PDCD7Q8N8D1 485 aaKnown RBP17.92■□□□□ 0.46
COL7A1-208ENST00000470076 DCAF4L2Q8NA75 395 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 TBCBQ99426 244 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 PSMB7Q99436 277 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 NAA15Q9BXJ9 866 aaKnown RBP17.92■□□□□ 0.46
COL7A1-208ENST00000470076 VPS51Q9UID3 782 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 FHOD1Q9Y613 1164 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 CELSR3Q9NYQ7 3312 aa17.92■□□□□ 0.46
COL7A1-208ENST00000470076 IGLV3-10A0A075B6K4 115 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 E9PAM4 449 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 PRAMEF26H0Y7S4 382 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 PES1O00541 588 aaKnown RBP17.91■□□□□ 0.46
COL7A1-208ENST00000470076 SNAP91O60641 907 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 RNGTTO60942 597 aaKnown RBP17.91■□□□□ 0.46
COL7A1-208ENST00000470076 MT-CO1P00395 513 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 UCHL3P15374 230 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 CHRNA3P32297 505 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 HSP90AA4PQ58FG1 418 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 SFMBT2Q5VUG0 894 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 NEK5Q6P3R8 708 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 SPATS2Q86XZ4 545 aaKnown RBP17.91■□□□□ 0.46
COL7A1-208ENST00000470076 EID2Q8N6I1 236 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 TMIEQ8NEW7 156 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 OR2A12Q8NGT7 310 aa17.91■□□□□ 0.46
COL7A1-208ENST00000470076 A0A0D9SEW6 157 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 FAM149AA5PLN7 773 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 KPNA3O00505 521 aaPredicted RBP17.9■□□□□ 0.46
COL7A1-208ENST00000470076 RFPL3O75679 317 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 PRNPP04156 253 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 CTSLP07711 333 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 EEF1GP26641 437 aaKnown RBP17.9■□□□□ 0.46
COL7A1-208ENST00000470076 OR1E1P30953 314 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 FLT3P36888 993 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 TAS2R38P59533 333 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 BNIP3Q12983 259 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 CT47A1Q5JQC4 288 aaPredicted RBP17.9■□□□□ 0.46
COL7A1-208ENST00000470076 PIP5KL1Q5T9C9 394 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 TAF3Q5VWG9 929 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 ARCQ7LC44 396 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 TFAP2DQ7Z6R9 452 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 MARCH9Q86YJ5 346 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 HAPLN3Q96S86 360 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 STK33Q9BYT3 514 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 NUP62CLQ9H1M0 184 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 DYRK4Q9NR20 520 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 MPP6Q9NZW5 540 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 RAXQ9Y2V3 346 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 SNX10Q9Y5X0 201 aa17.9■□□□□ 0.46
COL7A1-208ENST00000470076 ILVBLA1L0T0 632 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 F8VZ95 297 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 K7ERQ8 282 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 CBX4O00257 560 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 RRM1P23921 792 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 HNF1BP35680 557 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 ACADVLP49748 655 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 CYP4F3Q08477 520 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 DNAJC3Q13217 504 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 C19orf48Q6RUI8 117 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 ZNF783Q6ZMS7 281 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 KANSL1Q7Z3B3 1105 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 BNIPLQ7Z465 357 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 NOP9Q86U38 636 aaKnown RBP17.89■□□□□ 0.45
COL7A1-208ENST00000470076 EPS8L1Q8TE68 723 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 TSC1Q92574 1164 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 TMPRSS4Q9NRS4 437 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 SAMSN1Q9NSI8 373 aaKnown RBP17.89■□□□□ 0.45
COL7A1-208ENST00000470076 TMEM59LQ9UK28 342 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 IGSF10Q6WRI0 2623 aa17.89■□□□□ 0.45
COL7A1-208ENST00000470076 GOLGA8SH3BPF8 625 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 SMAD6O43541 496 aaKnown RBP17.88■□□□□ 0.45
COL7A1-208ENST00000470076 SRGAP2O75044 1071 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 RECQLP46063 649 aaPredicted RBP17.88■□□□□ 0.45
COL7A1-208ENST00000470076 NOMO3P69849 1222 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 SLC20A2Q08357 652 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 ILKQ13418 452 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 C2CD6Q53TS8 623 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 TCP11X2Q5H9J9 407 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 RETSATQ6NUM9 610 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 C22orf39Q6P5X5 142 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 LINGO4Q6UY18 593 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 ZNF677Q86XU0 584 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 TMEM145Q8NBT3 493 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 KLHDC7BQ96G42 594 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 PPP1R16AQ96I34 528 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 CFAP57Q96MR6 1250 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 ZYG11BQ9C0D3 744 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 SCUBE2Q9NQ36 999 aa17.88■□□□□ 0.45
COL7A1-208ENST00000470076 BAHCC1Q9P281 2608 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 A0A1W2PQU0 124 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 SLC31A1O15431 190 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 MMEP08473 750 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 JUPP14923 745 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 COL28A1Q2UY09 1125 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 ARTNQ5T4W7 220 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 NAA35Q5VZE5 725 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 TRNP1Q6NT89 227 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 ERN2Q76MJ5 926 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms