RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 HNRNPKP61978 463 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 CENPCQ03188 943 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 CCDC15Q0P6D6 951 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 EIF4EBP2Q13542 120 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 RABGAP1LQ5R372 815 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 SEL1L3Q68CR1 1132 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 FBXL22Q6P050 247 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 GUSBP11Q6P575 273 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 KRBA2Q6ZNG9 492 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 ZNF548Q8NEK5 533 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 ARRDC3Q96B67 414 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 NT5C1BQ96P26 610 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 POPDC2Q9HBU9 364 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.34e-7■■■■■ 28.7
TRAPPC12-216ENST00000469400 VPS28Q9UK41 221 aa13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 ZFR2Q9UPR6 939 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-216ENST00000469400 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 A6NNZ2 444 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 RNF103O00237 685 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 PCDH8O95206 1070 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 MT-CO1P00395 513 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 CSF2P04141 144 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 CHRNA3P32297 505 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 ACADSBP45954 432 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 FMO5P49326 533 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 IRAK1P51617 712 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 YWHAZP63104 245 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 FKBP3Q00688 224 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 CLN3Q13286 438 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 ZNF177Q13360 481 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 FZD2Q14332 565 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 ARL13BQ3SXY8 428 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 OR6B2Q6IFH4 312 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 ZCCHC8Q6NZY4 707 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 FOXR1Q6PIV2 292 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 RBM44Q6ZP01 1051 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 EFL1Q7Z2Z2 1120 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 PTAR1Q7Z6K3 402 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 DCP2Q8IU60 420 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 PPM1KQ8N3J5 372 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 EXD3Q8N9H8 876 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 TMIEQ8NEW7 156 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 OR2A12Q8NGT7 310 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 FAM174AQ8TBP5 190 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 RNF34Q969K3 372 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 BMFQ96LC9 184 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 RPRD1AQ96P16 312 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 SLC4A5Q9BY07 1137 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 TRIM4Q9C037 500 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 GPR27Q9NS67 375 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 NCKIPSDQ9NZQ3 722 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 ARMCX3Q9UH62 379 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 IL17BQ9UHF5 180 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 KLF15Q9UIH9 416 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 HS3ST2Q9Y278 367 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 HS3ST3A1Q9Y663 406 aa13.14□□□□□ -0.31
TRAPPC12-216ENST00000469400 EME2A4GXA9 379 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 POM121BA6NF01 834 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 TNFSF15O95150 251 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 SLC2A3P11169 496 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 SRCP12931 536 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 NME1P15531 152 aaKnown RBP13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 CCR1P32246 355 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 PRCPP42785 496 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 PMS1P54277 932 aaKnown RBP13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 AUHQ13825 339 aaKnown RBP13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 TAF5Q15542 800 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 ZSCAN23Q3MJ62 389 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 TMEM259Q4ZIN3 620 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 ANKRD40Q6AI12 368 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 DENND1BQ6P3S1 775 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 CRTC1Q6UUV9 634 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 ERN2Q76MJ5 926 aaKnown RBP13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 RRAGAQ7L523 313 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 CLEC14AQ86T13 490 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 ARL14Q8N4G2 192 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 ATP11CQ8NB49 1132 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 TPCN2Q8NHX9 752 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 STK32AQ8WU08 396 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 SPATA32Q96LK8 384 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 MED15Q96RN5 788 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 TSG101Q99816 390 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 FAM117AQ9C073 453 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 FAM204AQ9H8W3 233 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 DYRK4Q9NR20 520 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 VANGL2Q9ULK5 521 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 HEMK1Q9Y5R4 338 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 CSNK1G3Q9Y6M4 447 aa13.13□□□□□ -0.31
TRAPPC12-216ENST00000469400 SYNJ2BP-COX16A0A087WUM0 186 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 SPTY2D1-AS1A0A0U1RR47 76 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 E5RJQ4 531 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 K7ERQ8 282 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 CASC3O15234 703 aaKnown RBP13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 PMM2O15305 246 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 RAD51BO15315 384 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 EFSO43281 561 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 SNAP91O60641 907 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms