RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SCNN1GP51170 649 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 TAGLNQ01995 201 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 GNA12Q03113 381 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 SELENBP1Q13228 472 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 HNRNPDQ14103 355 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 TDRD10Q5VZ19 366 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 SLFN12LQ6IEE8 588 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 CPNE8Q86YQ8 564 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 CATSPER1Q8NEC5 780 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 RNF34Q969K3 372 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 NSL1Q96IY1 281 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 TBATAQ96M53 351 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 CDK5RAP1Q96SZ6 601 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 SLITRK6Q9H5Y7 841 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 PRR23AA6NEV1 266 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 H3BRJ5 948 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 M0QYV0 167 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 PGRMC1O00264 195 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 GPC4O75487 556 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 MFN2O95140 757 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 M6PRP20645 277 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 STX1BP61266 288 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 POLR2GP62487 172 aaKnown RBP eCLIP10.12□□□□□ -0.79
NUP50-214ENST00000469163 PRAMEP78395 509 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 RHAGQ02094 409 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 RABGAP1LQ5R372 815 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 HYIQ5T013 277 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 UBAP2Q5T6F2 1119 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 OR6B2Q6IFH4 312 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 AADACL2Q6P093 401 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 TAS1R3Q7RTX0 852 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 CTU1Q7Z7A3 348 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 MAP4K3Q8IVH8 894 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 UNC45BQ8IWX7 931 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 CFAP36Q96G28 342 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 HPDLQ96IR7 371 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 ZFYVE19Q96K21 471 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 TM9SF2Q99805 663 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 C16orf70Q9BSU1 422 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 DPP7Q9UHL4 492 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 ST3GAL5Q9UNP4 418 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 APOBEC2Q9Y235 224 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 PSMD12O00232 456 aaPredicted RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 NOL3O60936 208 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 ACSL3O95573 720 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 SERPING1P05155 500 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 ACRP10323 421 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 ICAM2P13598 275 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 FOXN2P32314 431 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 SOX11P35716 441 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 EFNA5P52803 228 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 LBX1P52954 281 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 GALCP54803 685 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 FCHO2Q0JRZ9 810 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 LAPTM5Q13571 262 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 TOMM20Q15388 145 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 TLR1Q15399 786 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 C21orf62-AS1Q17RA5 79 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 HP1BP3Q5SSJ5 553 aaPredicted RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 ZNF618Q5T7W0 954 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 RWDD4Q6NW29 188 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 VSTM1Q6UX27 236 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 TRPV1Q8NER1 839 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 TTLQ8NG68 377 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 SOCS4Q8WXH5 440 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 NDRG1Q92597 394 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 CDKL2Q92772 493 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 TRIT1Q9H3H1 467 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 NTN4Q9HB63 628 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 NGRNQ9NPE2 291 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 BRD7Q9NPI1 651 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 GNPTGQ9UJJ9 305 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 ANAPC7Q9UJX3 599 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 PCDHGB4Q9UN71 923 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 AP3M1Q9Y2T2 418 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 NOC2LQ9Y3T9 749 aaKnown RBP10.12□□□□□ -0.79
NUP50-214ENST00000469163 PCDHGB5Q9Y5G0 923 aa10.12□□□□□ -0.79
NUP50-214ENST00000469163 TRAV6A0A075B6T7 132 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 B2RBV5 119 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 OGTO15294 1046 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 BUD23O43709 281 aaKnown RBP10.11□□□□□ -0.79
NUP50-214ENST00000469163 FKTNO75072 461 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 SOX5P35711 763 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 GTF2BQ00403 316 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 SPCS2Q15005 226 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 KCNT1Q5JUK3 1230 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 MPZL3Q6UWV2 235 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 OTOP2Q7RTS6 562 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 ANKRD53Q8N9V6 530 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 FBXO25Q8TCJ0 367 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 FIG4Q92562 907 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 SERPINB12Q96P63 405 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 HAPLN2Q9GZV7 340 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 SAR1AQ9NR31 198 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 EMC3Q9P0I2 261 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 VPS4AQ9UN37 437 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 EVPLQ92817 2033 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 EIF3DO15371 548 aaKnown RBP eCLIP10.11□□□□□ -0.79
NUP50-214ENST00000469163 C22orf31O95567 290 aa10.11□□□□□ -0.79
NUP50-214ENST00000469163 IGFBP6P24592 240 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms