RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 PTPN7P35236 360 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 SERPINB6P35237 376 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 NNMTP40261 264 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ARL4AP40617 200 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CXCL12P48061 93 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 SOX9P48436 509 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ARSEP51690 589 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ATXN1P54253 815 aaKnown RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 NRLP54845 237 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 VCPP55072 806 aaKnown RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 TPI1P60174 286 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CCZ1BP86790 482 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CCZ1P86791 482 aaPredicted RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 GNA12Q03113 381 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CCDC173Q0VFZ6 552 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 POU4F2Q12837 409 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 MTAPQ13126 283 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 DPYSQ14117 519 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ELAVL3Q14576 367 aaKnown RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 RFTN1Q14699 578 aaPredicted RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 UBXN2BQ14CS0 331 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 PON2Q15165 354 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CRY1Q16526 586 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 PPP2R5EQ16537 467 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 TAZQ16635 292 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CDO1Q16878 200 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 GEN1Q17RS7 908 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 INO80DQ53TQ3 878 aaPredicted RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 PITRM1Q5JRX3 1037 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 SPDYCQ5MJ68 293 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 SH3PXD2AQ5TCZ1 1133 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 TMCO4Q5TGY1 634 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 AFMIDQ63HM1 303 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 SDE2Q6IQ49 451 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 RETSATQ6NUM9 610 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 SCYL2Q6P3W7 929 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 RFWD3Q6PCD5 774 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 RFX8Q6ZV50 586 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CYP2U1Q7Z449 544 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 C11orf74Q86VG3 221 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 RASSF3Q86WH2 238 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 C1orf210Q8IVY1 113 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 RHOT1Q8IXI2 618 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 KATNAL2Q8IYT4 538 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 LGI2Q8N0V4 545 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CCDC185Q8N715 623 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ZNF513Q8N8E2 541 aaPredicted RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 TMEM105Q8N8V8 129 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 LRRC57Q8N9N7 239 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 IL17RCQ8NAC3 791 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 DTWD2Q8NBA8 298 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 SPC24Q8NBT2 197 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 TTC16Q8NEE8 873 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 FLCNQ8NFG4 579 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 TRIM58Q8NG06 486 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 TPCN2Q8NHX9 752 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 EZH1Q92800 747 aaPredicted RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 IGSF8Q969P0 613 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ISG20Q96AZ6 181 aaKnown RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ALG14Q96F25 216 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 P2RY11Q96G91 374 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 LRIG1Q96JA1 1093 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CSPG4P5Q96PW8 444 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 PEBP4Q96S96 227 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 FEM1AQ9BSK4 669 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 LRFN3Q9BTN0 628 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 SNRNP25Q9BV90 132 aaKnown RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ACE2Q9BYF1 805 aaPredicted RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 TRIM7Q9C029 511 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CEP44Q9C0F1 390 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 LACRTQ9GZZ8 138 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 BRD8Q9H0E9 1235 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 TMEM245Q9H330 911 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 KDM4CQ9H3R0 1056 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 SEMA4AQ9H3S1 761 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 LMAN1LQ9HAT1 526 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 FBRSL1Q9HCM7 1045 aaKnown RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CD248Q9HCU0 757 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 OSGEPQ9NPF4 335 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 KCND1Q9NSA2 647 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ABCB8Q9NUT2 735 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ELOVL2Q9NXB9 296 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 DDX56Q9NY93 547 aaKnown RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 STIM2Q9P246 746 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 THAP10Q9P2Z0 257 aaPredicted RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 MYO1AQ9UBC5 1043 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 GDF2Q9UK05 429 aaPredicted RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 VANGL2Q9ULK5 521 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 TPX2Q9ULW0 747 aaKnown RBP3.61□□□□□ -1.83
TRIM59-202ENST00000468542 CA14Q9ULX7 337 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 MMP17Q9ULZ9 603 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 SCML1Q9UN30 329 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 PLA2G4CQ9UP65 541 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 SLC8A2Q9UPR5 921 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 PCDHGA2Q9Y5H1 932 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 HRH3Q9Y5N1 445 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 RAD54BQ9Y620 910 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ALG6Q9Y672 507 aa3.61□□□□□ -1.83
TRIM59-202ENST00000468542 ANKRD36A6QL64 1941 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms