RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 LINGO4Q6UY18 593 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 CHPFQ8IZ52 775 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 CCDC33Q8N5R6 958 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 ATP11CQ8NB49 1132 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 CCNYQ8ND76 341 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 TFB1MQ8WVM0 346 aaKnown RBP15.52■□□□□ 0.08
SNIP1-202ENST00000468040 ZNF599Q96NL3 588 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 LMAN1LQ9HAT1 526 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 HOMER3Q9NSC5 361 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 THAP10Q9P2Z0 257 aaPredicted RBP15.52■□□□□ 0.08
SNIP1-202ENST00000468040 RNF14Q9UBS8 474 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 UBA2Q9UBT2 640 aaPredicted RBP15.52■□□□□ 0.08
SNIP1-202ENST00000468040 SIT1Q9Y3P8 196 aa15.52■□□□□ 0.08
SNIP1-202ENST00000468040 NYNRINQ9P2P1 1898 aaKnown RBP15.51■□□□□ 0.07
SNIP1-202ENST00000468040 TCRBV7S2A1N4TA0A589 114 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 ESPNB1AK53 854 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 J3KR12 359 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 TNFRSF10AO00220 468 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 ZNF185O15231 689 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 MTSS1O43312 755 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 RNF40O75150 1001 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 TIE1P35590 1138 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 EIF3EP60228 445 aaKnown RBP15.51■□□□□ 0.07
SNIP1-202ENST00000468040 ZNF234Q14588 700 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 C2orf27AQ580R0 203 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 TMCO4Q5TGY1 634 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 EGFLAMQ63HQ2 1017 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 SDE2Q6IQ49 451 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 SERPINA13PQ6UXR4 307 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 ARHGAP36Q6ZRI8 547 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 ADAT2Q7Z6V5 191 aaKnown RBP15.51■□□□□ 0.07
SNIP1-202ENST00000468040 ZC3H18Q86VM9 953 aaKnown RBP15.51■□□□□ 0.07
SNIP1-202ENST00000468040 CCDC13Q8IYE1 715 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 CCDC105Q8IYK2 499 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 SH2D3CQ8N5H7 860 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 FLCNQ8NFG4 579 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 KIF18AQ8NI77 898 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 USP33Q8TEY7 942 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 ZNF592Q92610 1267 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 CLDN23Q96B33 292 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 MS4A14Q96JA4 679 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 RPL10LQ96L21 214 aaKnown RBP15.51■□□□□ 0.07
SNIP1-202ENST00000468040 MRGPRX3Q96LB0 322 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 FERMT1Q9BQL6 677 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 CEP44Q9C0F1 390 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 RBM12Q9NTZ6 932 aaKnown RBP15.51■□□□□ 0.07
SNIP1-202ENST00000468040 HAUS2Q9NVX0 235 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 MTF2Q9Y483 593 aaPredicted RBP15.51■□□□□ 0.07
SNIP1-202ENST00000468040 NUP205Q92621 2012 aa15.51■□□□□ 0.07
SNIP1-202ENST00000468040 GOLGA6L10A0A0M3HER8 536 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 H7C0C1 242 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 MATN3O15232 486 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 ATP9BO43861 1147 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 ZNF500O60304 480 aaPredicted RBP15.5■□□□□ 0.07
SNIP1-202ENST00000468040 ATG13O75143 517 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 CHRM1P11229 460 aaPredicted RBP15.5■□□□□ 0.07
SNIP1-202ENST00000468040 NTSR1P30989 418 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 PAFAH1B1P43034 410 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 MAGEA9P43362 315 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 RPS9P46781 194 aaKnown RBP15.5■□□□□ 0.07
SNIP1-202ENST00000468040 ATP5OP48047 213 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 STK19P49842 368 aaPredicted RBP15.5■□□□□ 0.07
SNIP1-202ENST00000468040 RENBPP51606 427 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 AP1B1Q10567 949 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 ENPP2Q13822 863 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 HNRNPDQ14103 355 aaKnown RBP15.5■□□□□ 0.07
SNIP1-202ENST00000468040 PRKD1Q15139 912 aaPredicted RBP15.5■□□□□ 0.07
SNIP1-202ENST00000468040 SLC45A4Q5BKX6 768 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 EMC10Q5UCC4 262 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 CDKL3Q8IVW4 592 aaPredicted RBP15.5■□□□□ 0.07
SNIP1-202ENST00000468040 BBS5Q8N3I7 341 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 MYO19Q96H55 970 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 QKIQ96PU8 341 aaKnown RBP eCLIP15.5■□□□□ 0.073e-7■■■■■ 27.5
SNIP1-202ENST00000468040 LGMNQ99538 433 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 IER2Q9BTL4 223 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 TMEM245Q9H330 911 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 HCN2Q9UL51 889 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 STON1Q9Y6Q2 735 aa15.5■□□□□ 0.07
SNIP1-202ENST00000468040 MUC22E2RYF6 1773 aaPredicted RBP15.49■□□□□ 0.07
SNIP1-202ENST00000468040 CHURC1-FNTBB4DL54 471 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 KLF8O95600 359 aaPredicted RBP15.49■□□□□ 0.07
SNIP1-202ENST00000468040 CD160O95971 181 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 MT-CO1P00395 513 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 RBP3P10745 1247 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 SRCP12931 536 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 IL12RB1P42701 662 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 FZD5Q13467 585 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 SIX1Q15475 284 aaPredicted RBP15.49■□□□□ 0.07
SNIP1-202ENST00000468040 CCNG2Q16589 344 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 ACCSLQ4AC99 568 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 EOGTQ5NDL2 527 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 MARC1Q5VT66 337 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 CWF19L1Q69YN2 538 aaKnown RBP15.49■□□□□ 0.07
SNIP1-202ENST00000468040 CREG2Q8IUH2 290 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 ALLCQ8N6M5 410 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 IL17RCQ8NAC3 791 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 RPLP0P6Q8NHW5 317 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 SLC35B2Q8TB61 432 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 MAML1Q92585 1016 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 ISG20Q96AZ6 181 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms