RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 MX2P20592 715 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 GJA4P35212 333 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 ATP5OP48047 213 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 YBEYP58557 167 aaPredicted RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 AP1B1Q10567 949 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 NR1H3Q13133 447 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 RNF219Q5W0B1 726 aaPredicted RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 IL31Q6EBC2 164 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 ASTLQ6HA08 431 aaPredicted RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 MYLK4Q86YV6 388 aaPredicted RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 ETFBKMTQ8IXQ9 262 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 SNRNP27Q8WVK2 155 aaKnown RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 HDAC11Q96DB2 347 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 CHFRQ96EP1 664 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 KRT12Q99456 494 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 FEM1AQ9BSK4 669 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 MAGEH1Q9H213 219 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 DNAJC17Q9NVM6 304 aaKnown RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 AMACRQ9UHK6 382 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 VPS28Q9UK41 221 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 RAD54BQ9Y620 910 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 NARSO43776 548 aaKnown RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 MAFKO60675 156 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 TULP3O75386 442 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 VAV1P15498 845 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 GLDCP23378 1020 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 RBL1P28749 1068 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 CHRNA3P32297 505 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 COILP38432 576 aaPredicted RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 NRLP54845 237 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 GDF10P55107 478 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 ZP2Q05996 745 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 PPIDQ08752 370 aaKnown RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 CCDC15Q0P6D6 951 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 MESP2Q0VG99 397 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 XRCC4Q13426 336 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 SERINC3Q13530 473 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 ITPRIPL2Q3MIP1 535 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 SLC45A4Q5BKX6 768 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 DRICH1Q6PGQ1 229 aaPredicted RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 DARS2Q6PI48 645 aaKnown RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 ADHFE1Q8IWW8 467 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 CCDC105Q8IYK2 499 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 APCDD1Q8J025 514 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 NOA1Q8NC60 698 aaKnown RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 TFB1MQ8WVM0 346 aaKnown RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 NKD2Q969F2 451 aaPredicted RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 ALG14Q96F25 216 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 CCDC114Q96M63 670 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 QKIQ96PU8 341 aaKnown RBP eCLIP7.01□□□□□ -1.291e-6■■■■□ 22.6
SCAF4-204ENST00000467731 XPO6Q96QU8 1125 aaKnown RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 SPON2Q9BUD6 331 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 FRMD8P1Q9BZ68 369 aaPredicted RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 ATP13A1Q9HD20 1204 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 KIAA1522Q9P206 1035 aaPredicted RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 IPO11Q9UI26 975 aaKnown RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 GGA2Q9UJY4 613 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 FBXO10Q9UK96 956 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 INTS6Q9UL03 887 aaKnown RBP7.01□□□□□ -1.29
SCAF4-204ENST00000467731 ZNF148Q9UQR1 794 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 J3KR12 359 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 KCNK1O00180 336 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 CBX4O00257 560 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 ITGAVP06756 1048 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 ACTN2P35609 894 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 SLC6A11P48066 632 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 SOX9P48436 509 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 FNTAP49354 379 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 DGKGP49619 791 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 MRPS25P82663 173 aaKnown RBP7□□□□□ -1.29
SCAF4-204ENST00000467731 PRKD1Q15139 912 aaPredicted RBP7□□□□□ -1.29
SCAF4-204ENST00000467731 PLEKHG6Q3KR16 790 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 HEATR6Q6AI08 1181 aaKnown RBP7□□□□□ -1.29
SCAF4-204ENST00000467731 ZNF783Q6ZMS7 281 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 ZNF557Q8N988 423 aaPredicted RBP7□□□□□ -1.29
SCAF4-204ENST00000467731 CSGALNACT1Q8TDX6 532 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 LMLNQ96KR4 655 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 OR51B4Q9Y5P0 310 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 ANKRD36A6QL64 1941 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 BCLAF3A2AJT9 711 aaKnown RBP7□□□□□ -1.29
SCAF4-204ENST00000467731 HACD1B0YJ81 288 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 KCNN4O15554 427 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 SNAP91O60641 907 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 PABPC1P11940 636 aaKnown RBP7□□□□□ -1.29
SCAF4-204ENST00000467731 ETFBP38117 255 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 GEN1Q17RS7 908 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 FUT11Q495W5 492 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 LRRC49Q8IUZ0 686 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 FAM71DQ8N9W8 422 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 C17orf50Q8WW18 174 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 HTR3CQ8WXA8 447 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 ZNF419Q96HQ0 510 aaPredicted RBP7□□□□□ -1.29
SCAF4-204ENST00000467731 ACE2Q9BYF1 805 aaPredicted RBP7□□□□□ -1.29
SCAF4-204ENST00000467731 CEP41Q9BYV8 373 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 SLC2A11Q9BYW1 496 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 SP110Q9HB58 689 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 USP29Q9HBJ7 922 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 HEBP1Q9NRV9 189 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 SEPT10Q9P0V9 454 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 DEC1Q9P2X7 70 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms