RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 NPWQ8N729 165 aa26.54■■□□□ 1.84
PDCD4-205ENST00000467574 ATP11CQ8NB49 1132 aa26.54■■□□□ 1.84
PDCD4-205ENST00000467574 BAG1Q99933 345 aaPredicted RBP26.54■■□□□ 1.84
PDCD4-205ENST00000467574 TMEM110-MUSTN1A8MSY1 372 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 ARHGAP25P42331 645 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 HADHBP55084 474 aaKnown RBP26.53■■□□□ 1.84
PDCD4-205ENST00000467574 ZBTB16Q05516 673 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 SPA17Q15506 151 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 PARP15Q460N3 678 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 ACCSLQ4AC99 568 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 ATP13A4Q4VNC1 1196 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 RETSATQ6NUM9 610 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 C22orf39Q6P5X5 142 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 ARHGAP12Q8IWW6 846 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 RUBCNQ92622 972 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 LOXL4Q96JB6 756 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 CSPG4P5Q96PW8 444 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 MFHAS1Q9Y4C4 1052 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 PI4KAP42356 2102 aa26.53■■□□□ 1.84
PDCD4-205ENST00000467574 RCCD1A6NED2 376 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 H3BRJ5 948 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 KDELR3O43731 214 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 EPN2O95208 641 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 RETP07949 1114 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 CD48P09326 243 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 IL4RP24394 825 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 SSR1P43307 286 aaKnown RBP26.52■■□□□ 1.84
PDCD4-205ENST00000467574 SLC20A2Q08357 652 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 SERINC3Q13530 473 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 ELF2Q15723 593 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 HADHQ16836 314 aaKnown RBP26.52■■□□□ 1.84
PDCD4-205ENST00000467574 MMAAQ8IVH4 418 aaKnown RBP26.52■■□□□ 1.84
PDCD4-205ENST00000467574 DCLK2Q8N568 766 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 PABPC3Q9H361 631 aaKnown RBP26.52■■□□□ 1.84
PDCD4-205ENST00000467574 ETNK2Q9NVF9 386 aa26.52■■□□□ 1.84
PDCD4-205ENST00000467574 WSB2Q9NYS7 404 aaPredicted RBP26.52■■□□□ 1.84
PDCD4-205ENST00000467574 RHOBTB1O94844 696 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 CD6P30203 668 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 GJC1P36383 396 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 NDST2P52849 883 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 CST6Q15828 149 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 SLC36A4Q6YBV0 504 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 ACRBPQ8NEB7 543 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 OR2A12Q8NGT7 310 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 CELF6Q96J87 481 aaKnown RBP26.51■■□□□ 1.83
PDCD4-205ENST00000467574 CEP44Q9C0F1 390 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 DONSONQ9NYP3 566 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 NCDNQ9UBB6 729 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 GMEB2Q9UKD1 530 aa26.51■■□□□ 1.83
PDCD4-205ENST00000467574 SHROOM3Q8TF72 1996 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 A0A0A6YYK5 440 aaPredicted RBP26.5■■□□□ 1.83
PDCD4-205ENST00000467574 MID1O15344 667 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 DAPK3O43293 454 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 ACADMP11310 421 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 TGM1P22735 817 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 AMPD1P23109 780 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 ARL4AP40617 200 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 CDH6P55285 790 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 RPL6Q02878 288 aaKnown RBP26.5■■□□□ 1.83
PDCD4-205ENST00000467574 DPYSL3Q14195 570 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 TMEFF1Q8IYR6 380 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 NETO2Q8NC67 525 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 TOE1Q96GM8 510 aaKnown RBP26.5■■□□□ 1.83
PDCD4-205ENST00000467574 SLC39A8Q9C0K1 460 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 PDFQ9HBH1 243 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 KLHL11Q9NVR0 708 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 RCOR3Q9P2K3 495 aaPredicted RBP26.5■■□□□ 1.83
PDCD4-205ENST00000467574 SERGEFQ9UGK8 458 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 SALL4Q9UJQ4 1053 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 SARDHQ9UL12 918 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 HPCAL4Q9UM19 191 aa26.5■■□□□ 1.83
PDCD4-205ENST00000467574 FCF1Q9Y324 198 aaKnown RBP26.5■■□□□ 1.83
PDCD4-205ENST00000467574 MCF2LO15068 1137 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 ALOX15BO15296 676 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 RNASEH1O60930 286 aaKnown RBP26.49■■□□□ 1.83
PDCD4-205ENST00000467574 DNTTP04053 509 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 PTGER3P43115 390 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 PSMD8P48556 350 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 METAP1P53582 386 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 MMRN1Q13201 1228 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 SPDYCQ5MJ68 293 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 LEKR1Q6ZMV7 388 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 LPCAT2Q7L5N7 544 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 TP53INP2Q8IXH6 220 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 AADATQ8N5Z0 425 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 OR8D1Q8WZ84 308 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 TNKS2Q9H2K2 1166 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 LUC7LQ9NQ29 371 aaKnown RBP26.49■■□□□ 1.83
PDCD4-205ENST00000467574 SCML1Q9UN30 329 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 CEP250Q9BV73 2442 aa26.49■■□□□ 1.83
PDCD4-205ENST00000467574 ZSCAN5CA6NGD5 496 aaPredicted RBP26.48■■□□□ 1.83
PDCD4-205ENST00000467574 MAP3K13O43283 966 aa26.48■■□□□ 1.83
PDCD4-205ENST00000467574 CTSLP07711 333 aa26.48■■□□□ 1.83
PDCD4-205ENST00000467574 KRT7P08729 469 aa26.48■■□□□ 1.83
PDCD4-205ENST00000467574 OXTRP30559 389 aa26.48■■□□□ 1.83
PDCD4-205ENST00000467574 GEMIN4P57678 1058 aaKnown RBP26.48■■□□□ 1.83
PDCD4-205ENST00000467574 KRT81Q14533 505 aa26.48■■□□□ 1.83
PDCD4-205ENST00000467574 TTC31Q49AM3 519 aaPredicted RBP26.48■■□□□ 1.83
PDCD4-205ENST00000467574 USP30Q70CQ3 517 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms