RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	SCAMP3	O14828	347 aa	Known RBP	12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	TSPAN3	O60637	253 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	CLASP2	O75122	1294 aa	Known RBP	12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	CLDN11	O75508	207 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	FGF19	O95750	216 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	RHOC	P08134	193 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	GJA1	P17302	382 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	PFKL	P17858	780 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	PGAM1	P18669	254 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	MAGEA10	P43363	369 aa	Predicted RBP	12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	RENBP	P51606	427 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	CRADD	P78560	199 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	GNA12	Q03113	381 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	CAMK1	Q14012	370 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	RASA2	Q15283	850 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	STXBP5	Q5T5C0	1151 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	MARC1	Q5VT66	337 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	STEAP4	Q687X5	459 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435		Q6ZNB5	142 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	RTL10	Q7L3V2	364 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	CYP4X1	Q8N118	509 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	HJURP	Q8NCD3	748 aa	Predicted RBP	12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	SPATA22	Q8NHS9	363 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	ARHGEF2	Q92974	986 aa	Known RBP	12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	MRRF	Q96E11	262 aa	Known RBP	12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	TGS1	Q96RS0	853 aa	Known RBP	12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	TBL1Y	Q9BQ87	522 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	TRIM56	Q9BRZ2	755 aa	Known RBP	12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	DHRS4	Q9BTZ2	278 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	CAPS2	Q9BXY5	557 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	MAGEH1	Q9H213	219 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	CNOT10	Q9H9A5	744 aa	Known RBP	12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	PLAC1	Q9HBJ0	212 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	NT5M	Q9NPB1	228 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	HCFC1R1	Q9NWW0	138 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	UBP1	Q9NZI7	540 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	SH3BP1	Q9Y3L3	701 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435	NOTCH4	Q99466	2003 aa		12.52	□□□□□ -0.4
HDLBP-231	ENST00000467435	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	TYW5	A2RUC4	315 aa	Known RBP	12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	NRG2	O14511	850 aa	Predicted RBP	12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	GREM1	O60565	184 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	PRAMEF11	O60813	436 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	SHOX2	O60902	331 aa	Predicted RBP	12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	RFPL2	O75678	378 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	MT-CYB	P00156	380 aa	Predicted RBP	12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	C1R	P00736	705 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	EPCAM	P16422	314 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	HOXA9	P31269	272 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	MSH2	P43246	934 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	EPHA5	P54756	1037 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	OXCT1	P55809	520 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	GNGT1	P63211	74 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	ZXDB	P98169	803 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	TNK2	Q07912	1038 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	SLC10A7	Q0GE19	358 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	NR1H3	Q13133	447 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	ZNF177	Q13360	481 aa	Predicted RBP	12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	GPM6B	Q13491	265 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	SHH	Q15465	462 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	KBTBD12	Q3ZCT8	623 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	TMCO4	Q5TGY1	634 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	IL31	Q6EBC2	164 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	LINC00523	Q86TU6	105 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	SETD3	Q86TU7	594 aa	Predicted RBP	12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	EXOC3L1	Q86VI1	746 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	CCNJL	Q8IV13	435 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	TEX26	Q8N6G2	289 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	DNAAF3	Q8N9W5	541 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	TTC16	Q8NEE8	873 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	IPMK	Q8NFU5	416 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	OR7D4	Q8NG98	312 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	SHKBP1	Q8TBC3	707 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	DCAKD	Q8WVC6	231 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	APOL2	Q9BQE5	337 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	NAT9	Q9BTE0	207 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	FICD	Q9BVA6	458 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	PDF	Q9HBH1	243 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	BFAR	Q9NZS9	450 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	SAMD15	Q9P1V8	674 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	CFAP97	Q9P2B7	532 aa		12.52	□□□□□ -0.41
HDLBP-231	ENST00000467435	DOCK6	Q96HP0	2047 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435		A0A0D9SEW6	157 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	ILVBL	A1L0T0	632 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	AP3B1	O00203	1094 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	TBL1X	O60907	577 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	PIAS1	O75925	651 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	C1QA	P02745	245 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	HNRNPA1	P09651	372 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	PTPN2	P17706	415 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	KRT15	P19012	456 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	PRKCH	P24723	683 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	DDX6	P26196	483 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	HOXD9	P28356	352 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	MDH1	P40925	334 aa	Known RBP	12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	CCR2	P41597	374 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	NUMB	P49757	651 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	MAX	P61244	160 aa		12.51	□□□□□ -0.41
HDLBP-231	ENST00000467435	ERVK-21	P61565	698 aa		12.51	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms