RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 P3H1Q32P28 736 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 KLHDC7AQ5VTJ3 777 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 RRAGBQ5VZM2 374 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 ABLIM2Q6H8Q1 611 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 TLDC1Q6P9B6 456 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 IGFN1Q86VF2 1251 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 DPP10Q8N608 796 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 PGLYRP2Q96PD5 576 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 MMP28Q9H239 520 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 TMOD4Q9NZQ9 345 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 FAM50BQ9Y247 325 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 RAPGEF6Q8TEU7 1601 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 ZFYVE16Q7Z3T8 1539 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 ATP10BO94823 1461 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 A0A087WZ62 844 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 POM121BA6NF01 834 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 CLCA1A8K7I4 914 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 XPNPEP2O43895 674 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 TSHRP16473 764 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 TNFSF8P32971 234 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 CASP5P51878 434 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 COBLL1Q53SF7 1204 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 GDPD4Q6W3E5 623 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 KRT27Q7Z3Y8 459 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 PALB2Q86YC2 1186 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 RNF152Q8N8N0 203 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 IL17RCQ8NAC3 791 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 ATP11CQ8NB49 1132 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 KDM1BQ8NB78 822 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 SECTM1Q8WVN6 248 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 TRMT61BQ9BVS5 477 aaKnown RBP4.04□□□□□ -1.76
XRN1-206ENST00000467077 SARGQ9BW04 601 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 PCDHB7Q9Y5E2 793 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 EFCAB5A4FU69 1503 aa4.04□□□□□ -1.76
XRN1-206ENST00000467077 DENND4BO75064 1496 aaPredicted RBP4.04□□□□□ -1.76
XRN1-206ENST00000467077 C3P01024 1663 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 STMND1H3BQB6 276 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 AREL1O15033 823 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 FGFR2P21802 821 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 C21orf33P30042 268 aaPredicted RBP4.03□□□□□ -1.76
XRN1-206ENST00000467077 CHRNA5P30532 468 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 ATICP31939 592 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 PRIM2P49643 509 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 HDAC1Q13547 482 aaPredicted RBP4.03□□□□□ -1.76
XRN1-206ENST00000467077 CRTC1Q6UUV9 634 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 KLHDC8BQ8IXV7 354 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 CCDC33Q8N5R6 958 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 LRRC46Q96FV0 321 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 SCMH1Q96GD3 660 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 SRPRBQ9Y5M8 271 aaKnown RBP4.03□□□□□ -1.76
XRN1-206ENST00000467077 AKNAQ7Z591 1439 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 YEATS2Q9ULM3 1422 aa4.03□□□□□ -1.76
XRN1-206ENST00000467077 HECW1Q76N89 1606 aa4.03□□□□□ -1.77
XRN1-206ENST00000467077 ZMYM4Q5VZL5 1548 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 MYO5CQ9NQX4 1742 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 IGLV5-52A0A0A0MRZ9 124 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 APAF1O14727 1248 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 PMM2O15305 246 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 ARP10275 920 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 TRIM27P14373 513 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 NAGAP17050 411 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 DGKAP23743 735 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 STT3AP46977 705 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 RBBP5Q15291 538 aaKnown RBP4.02□□□□□ -1.77
XRN1-206ENST00000467077 SAFBQ15424 915 aaKnown RBP eCLIP4.02□□□□□ -1.77
XRN1-206ENST00000467077 CCDC25Q86WR0 208 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 CD101Q93033 1021 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 TBCBQ99426 244 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 COLEC11Q9BWP8 271 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 MAGEB5Q9BZ81 275 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 IL21RQ9HBE5 538 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 ZBTB26Q9HCK0 441 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 MYO1AQ9UBC5 1043 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 UHRF1BP1Q6BDS2 1440 aa4.02□□□□□ -1.77
XRN1-206ENST00000467077 A0A1W2PPC4 97 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 FAM172BPA6NC97 362 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 PRAC2D3DTV9 90 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 ZSCAN9O15535 394 aaPredicted RBP4.01□□□□□ -1.77
XRN1-206ENST00000467077 COQ9O75208 318 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 MYL4P12829 197 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 STAT1P42224 750 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 TMPRSS3P57727 454 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 IFIT5Q13325 482 aaKnown RBP4.01□□□□□ -1.77
XRN1-206ENST00000467077 USP17L6PQ6QN14 398 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 BEND5Q7L4P6 421 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 LYG1Q8N1E2 194 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 LRRC57Q8N9N7 239 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 MIGA1Q8NAN2 632 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 NEK9Q8TD19 979 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 LRRC8CQ8TDW0 803 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 BICD1Q96G01 975 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 FEM1CQ96JP0 617 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 SFXN1Q9H9B4 322 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 FBXO28Q9NVF7 368 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 NFS1Q9Y697 457 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 LTBP4Q8N2S1 1624 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 SAMD9Q5K651 1589 aa4.01□□□□□ -1.77
XRN1-206ENST00000467077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4□□□□□ -1.77
XRN1-206ENST00000467077 ARHGEF12Q9NZN5 1544 aa4□□□□□ -1.77
XRN1-206ENST00000467077 IQSEC2Q5JU85 1478 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms