RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SUCOQ9UBS9 1254 aaKnown RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 TMCO1Q9UM00 188 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 FASP25445 335 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 ITGA1P56199 1179 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 NEK5Q6P3R8 708 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 RAD9BQ6WBX8 426 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 FIBCD1Q8N539 461 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 COL26A1Q96A83 441 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 LENG9Q96B70 501 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 SEPHS2Q99611 448 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 POLR1EQ9GZS1 481 aaKnown RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 EPB41L4BQ9H329 900 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 PDP2Q9P2J9 529 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 SLIT2O94813 1529 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 SGTAO43765 313 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 MAPTP10636 758 aaKnown RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 S100GP29377 79 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 APLP1P51693 650 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 MRPS35P82673 323 aaKnown RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 CORO1BQ9BR76 489 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 PTPRHQ9HD43 1115 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 ARL15Q9NXU5 204 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 ZNF624Q9P2J8 865 aaPredicted RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 PSME2Q9UL46 239 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 OR10H1Q9Y4A9 318 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 USP17L7P0C7H9 530 aa8.83□□□□□ -1
HPS4-209ENST00000466781 BDNFP23560 247 aa8.83□□□□□ -1
HPS4-209ENST00000466781 MGAT1P26572 445 aa8.83□□□□□ -1
HPS4-209ENST00000466781 HTR1BP28222 390 aa8.83□□□□□ -1
HPS4-209ENST00000466781 TTC23Q5W5X9 447 aa8.83□□□□□ -1
HPS4-209ENST00000466781 ZNF621Q6ZSS3 439 aa8.83□□□□□ -1
HPS4-209ENST00000466781 KRT74Q7RTS7 529 aa8.83□□□□□ -1
HPS4-209ENST00000466781 GPSM1Q86YR5 675 aa8.83□□□□□ -1
HPS4-209ENST00000466781 LRRC34Q8IZ02 419 aa8.83□□□□□ -1
HPS4-209ENST00000466781 EFCAB3Q8N7B9 438 aa8.83□□□□□ -1
HPS4-209ENST00000466781 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.83□□□□□ -1
HPS4-209ENST00000466781 HTR3CQ8WXA8 447 aa8.83□□□□□ -1
HPS4-209ENST00000466781 HGH1Q9BTY7 390 aa8.83□□□□□ -1
HPS4-209ENST00000466781 RIBC2Q9H4K1 309 aa8.83□□□□□ -1
HPS4-209ENST00000466781 DNMT3LQ9UJW3 386 aa8.83□□□□□ -1
HPS4-209ENST00000466781 DNPEPQ9ULA0 475 aa8.83□□□□□ -1
HPS4-209ENST00000466781 MKL2Q9ULH7 1088 aa8.83□□□□□ -1
HPS4-209ENST00000466781 PCDHA3Q9Y5H8 950 aa8.83□□□□□ -1
HPS4-209ENST00000466781 MTRF1O75570 445 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 YBX3P16989 372 aaKnown RBP eCLIP8.83□□□□□ -1
HPS4-209ENST00000466781 NFKB1P19838 968 aa8.83□□□□□ -1
HPS4-209ENST00000466781 FLT3LGP49771 235 aa8.83□□□□□ -1
HPS4-209ENST00000466781 TOB1P50616 345 aaPredicted RBP8.83□□□□□ -1
HPS4-209ENST00000466781 CCZ1BP86790 482 aa8.83□□□□□ -1
HPS4-209ENST00000466781 CCZ1P86791 482 aaPredicted RBP8.83□□□□□ -1
HPS4-209ENST00000466781 FASTKQ14296 549 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 KPNB1Q14974 876 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 RBM43Q6ZSC3 357 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 C7orf61Q8IZ16 206 aa8.83□□□□□ -1
HPS4-209ENST00000466781 TC2NQ8N9U0 490 aa8.83□□□□□ -1
HPS4-209ENST00000466781 ZNF671Q8TAW3 534 aa8.83□□□□□ -1
HPS4-209ENST00000466781 LIMD1Q9UGP4 676 aa8.83□□□□□ -1
HPS4-209ENST00000466781 KLF15Q9UIH9 416 aa8.83□□□□□ -1
HPS4-209ENST00000466781 HAO1Q9UJM8 370 aa8.83□□□□□ -1
HPS4-209ENST00000466781 MRPS23Q9Y3D9 190 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 NRCAMQ92823 1304 aa8.83□□□□□ -1
HPS4-209ENST00000466781 YDJCA8MPS7 323 aa8.83□□□□□ -1
HPS4-209ENST00000466781 LACTBL1A8MY62 500 aa8.83□□□□□ -1
HPS4-209ENST00000466781 AVILO75366 819 aa8.83□□□□□ -1
HPS4-209ENST00000466781 CYP1A1P04798 512 aaPredicted RBP8.83□□□□□ -1
HPS4-209ENST00000466781 ATP5C1P36542 298 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 RHBDL3P58872 404 aa8.83□□□□□ -1
HPS4-209ENST00000466781 C1QBPQ07021 282 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 OASLQ15646 514 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 ZBTB49Q6ZSB9 765 aa8.83□□□□□ -1
HPS4-209ENST00000466781 ZNF605Q86T29 641 aa8.83□□□□□ -1
HPS4-209ENST00000466781 CHPFQ8IZ52 775 aa8.83□□□□□ -1
HPS4-209ENST00000466781 METTL6Q8TCB7 284 aa8.83□□□□□ -1
HPS4-209ENST00000466781 ADAM2Q99965 735 aa8.83□□□□□ -1
HPS4-209ENST00000466781 BDH2Q9BUT1 245 aa8.83□□□□□ -1
HPS4-209ENST00000466781 TKTL2Q9H0I9 626 aa8.83□□□□□ -1
HPS4-209ENST00000466781 DLGAP2Q9P1A6 1054 aa8.83□□□□□ -1
HPS4-209ENST00000466781 SLC24A2Q9UI40 661 aa8.83□□□□□ -1
HPS4-209ENST00000466781 CROTQ9UKG9 612 aa8.83□□□□□ -1
HPS4-209ENST00000466781 EFCAB10A6NFE3 127 aa8.83□□□□□ -1
HPS4-209ENST00000466781 PIK3CDO00329 1044 aa8.83□□□□□ -1
HPS4-209ENST00000466781 CD3EAPO15446 510 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 SH3BGRLO75368 114 aa8.83□□□□□ -1
HPS4-209ENST00000466781 IL6P05231 212 aa8.83□□□□□ -1
HPS4-209ENST00000466781 RPL9P32969 192 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 S100A3P33764 101 aa8.83□□□□□ -1
HPS4-209ENST00000466781 GSSP48637 474 aa8.83□□□□□ -1
HPS4-209ENST00000466781 CCL23P55773 120 aa8.83□□□□□ -1
HPS4-209ENST00000466781 BMPR2Q13873 1038 aa8.83□□□□□ -1
HPS4-209ENST00000466781 RASA2Q15283 850 aa8.83□□□□□ -1
HPS4-209ENST00000466781 CCNG2Q16589 344 aa8.83□□□□□ -1
HPS4-209ENST00000466781 ZSWIM7Q19AV6 140 aa8.83□□□□□ -1
HPS4-209ENST00000466781 GPAT3Q53EU6 434 aa8.83□□□□□ -1
HPS4-209ENST00000466781 N4BP2L1Q5TBK1 243 aaPredicted RBP8.83□□□□□ -1
HPS4-209ENST00000466781 LYPLAL1Q5VWZ2 237 aa8.83□□□□□ -1
HPS4-209ENST00000466781 ZNF470Q6ECI4 717 aa8.83□□□□□ -1
HPS4-209ENST00000466781 IL27RAQ6UWB1 636 aa8.83□□□□□ -1
HPS4-209ENST00000466781 CXCL17Q6UXB2 119 aa8.83□□□□□ -1
HPS4-209ENST00000466781 AHI1Q8N157 1196 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms