RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TADA2AO75478 443 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 VAPBO95292 243 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 ADSLP30566 484 aaPredicted RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 SCNN1BP51168 640 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 ART3Q13508 389 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 RFTN1Q14699 578 aaPredicted RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 GRM3Q14832 879 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 KIZQ2M2Z5 673 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 NXNQ6DKJ4 435 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 PSTKQ8IV42 348 aaKnown RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 DEFB106AQ8N104 65 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 OR6B3Q8NGW1 331 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 ZSCAN18Q8TBC5 510 aaPredicted RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 NLRP7Q8WX94 980 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 IRGQQ8WZA9 623 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 ATP6V1E2Q96A05 226 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 TMA16Q96EY4 203 aaKnown RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 ZNF512Q96ME7 567 aaPredicted RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 IL22Q9GZX6 179 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 EFCAB1Q9HAE3 211 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 TIMMDC1Q9NPL8 285 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 CASS4Q9NQ75 786 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 SLC39A10Q9ULF5 831 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 CDYLQ9Y232 598 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 GOLGA8TH3BQL2 631 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 FZD9O00144 591 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 TRMUO75648 421 aaKnown RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 AP2A1O95782 977 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 SCNN1AP37088 669 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 GLRBP48167 497 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 RPL34P49207 117 aaKnown RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 SULT1E1P49888 294 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 BST2Q10589 180 aaKnown RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 PRKAA1Q13131 559 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 FRG1Q14331 258 aaKnown RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 NRF1Q16656 503 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 KCNMB4Q86W47 210 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 PHF12Q96QT6 1004 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 SMARCAD1Q9H4L7 1026 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 IARS2Q9NSE4 1012 aaKnown RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 BFARQ9NZS9 450 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 KLHL8Q9P2G9 620 aaPredicted RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 CIDEBQ9UHD4 219 aa13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 CNOT11Q9UKZ1 510 aaKnown RBP13.21□□□□□ -0.29
PDZRN3-205ENST00000466780 PHGDHO43175 533 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 TIMM44O43615 452 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 VTNP04004 478 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 PGK2P07205 417 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 PTPN3P26045 913 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 MATKP42679 507 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 PAFAH1B3Q15102 231 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 CYTH1Q15438 398 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 PTAR1Q7Z6K3 402 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 IFNLR1Q8IU57 520 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 NUP93Q8N1F7 819 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 ANKRD52Q8NB46 1076 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 GRIN3AQ8TCU5 1115 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 TMIGD2Q96BF3 282 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 ZMAT2Q96NC0 199 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 APOL2Q9BQE5 337 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 CHRAC1Q9NRG0 131 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 C20orf96Q9NUD7 363 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 RHBDL2Q9NX52 303 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 RGS17Q9UGC6 210 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 GMEB1Q9Y692 573 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 SYNJ2BP-COX16A0A087WUM0 186 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 TMEM233B4DJY2 109 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 CABYRO75952 493 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 CYP2C8P10632 490 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 PSMC3P17980 439 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 HK2P52789 917 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 CSE1LP55060 971 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 POU5F1BQ06416 359 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 DPYSQ14117 519 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 KCTD11Q693B1 232 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 CNTD1Q8N815 330 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 DNAAF3Q8N9W5 541 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 RDH11Q8TC12 318 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 KCTD4Q8WVF5 259 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 MLPHQ9BV36 600 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 SEMA6AQ9H2E6 1030 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 COQ10BQ9H8M1 238 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 COX16Q9P0S2 106 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 TUBGCP4Q9UGJ1 667 aa13.2□□□□□ -0.3
PDZRN3-205ENST00000466780 TARM1B6A8C7 271 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 TRIM38O00635 465 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 DCLK1O15075 740 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 TSPAN1O60635 241 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 PFDN1O60925 122 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 APOA4P06727 396 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 PDGFRBP09619 1106 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 INSRRP14616 1297 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 NELFEP18615 380 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 SAT1P21673 171 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 BCAT1P54687 386 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 TXNL4AP83876 142 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 SLC25A52Q3SY17 297 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 FBXO16Q8IX29 292 aaPredicted RBP13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 KDM1BQ8NB78 822 aa13.19□□□□□ -0.3
PDZRN3-205ENST00000466780 TSPAN14Q8NG11 270 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms