RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SYT13Q7L8C5 426 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 ZNF354CQ86Y25 554 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 TP53INP2Q8IXH6 220 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 C17orf53Q8N3J3 647 aaPredicted RBP16.33■□□□□ 0.2
GPC1-207ENST00000466624 ATPAF2Q8N5M1 289 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 ALLCQ8N6M5 410 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 HDAC11Q96DB2 347 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 PBKQ96KB5 322 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 ZNF599Q96NL3 588 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 OLFM3Q96PB7 478 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 TSGA13Q96PP4 275 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 HERPUD2Q9BSE4 406 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 HEMGNQ9BXL5 484 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 CEP44Q9C0F1 390 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 IPO11Q9UI26 975 aaKnown RBP16.33■□□□□ 0.2
GPC1-207ENST00000466624 SLC8A2Q9UPR5 921 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 STON1Q9Y6Q2 735 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 ANTXRLA6NF34 631 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 CES2O00748 559 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 MAFKO60675 156 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 PAPSS2O95340 614 aaPredicted RBP16.32■□□□□ 0.2
GPC1-207ENST00000466624 CD160O95971 181 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 ATP1A1P05023 1023 aaKnown RBP16.32■□□□□ 0.2
GPC1-207ENST00000466624 SRCP12931 536 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 CCNCP24863 283 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 STK19P49842 368 aaPredicted RBP16.32■□□□□ 0.2
GPC1-207ENST00000466624 DYNLT1P63172 113 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 RFTN1Q14699 578 aaPredicted RBP16.32■□□□□ 0.2
GPC1-207ENST00000466624 PDK1Q15118 436 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 TMCO4Q5TGY1 634 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 TIGD7Q6NT04 549 aaPredicted RBP16.32■□□□□ 0.2
GPC1-207ENST00000466624 SERPINA13PQ6UXR4 307 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 TTC13Q8NBP0 860 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 TXNDC5Q8NBS9 432 aaKnown RBP16.32■□□□□ 0.2
GPC1-207ENST00000466624 P3H4Q92791 437 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 ISG20Q96AZ6 181 aaKnown RBP16.32■□□□□ 0.2
GPC1-207ENST00000466624 RPL10LQ96L21 214 aaKnown RBP16.32■□□□□ 0.2
GPC1-207ENST00000466624 WDR24Q96S15 920 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 ACOX2Q99424 681 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 SP110Q9HB58 689 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 ZDBF2Q9HCK1 2354 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 CACNA2D2Q9NY47 1150 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 SUN2Q9UH99 717 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 SLCO3A1Q9UIG8 710 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 HEY1Q9Y5J3 304 aa16.32■□□□□ 0.2
GPC1-207ENST00000466624 TARSL2A2RTX5 802 aaKnown RBP16.31■□□□□ 0.2
GPC1-207ENST00000466624 J3KR12 359 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 SGK1O00141 431 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 PPP1R12AO14974 1030 aaPredicted RBP16.31■□□□□ 0.2
GPC1-207ENST00000466624 ADAM23O75077 832 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 PRLRP16471 622 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 NUMBP49757 651 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 ETF1P62495 437 aaKnown RBP16.31■□□□□ 0.2
GPC1-207ENST00000466624 PPIDQ08752 370 aaKnown RBP16.31■□□□□ 0.2
GPC1-207ENST00000466624 XRCC4Q13426 336 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 NOMO1Q15155 1222 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 HNRNPA1L2Q32P51 320 aaKnown RBP16.31■□□□□ 0.2
GPC1-207ENST00000466624 PAPD7Q5XG87 772 aaKnown RBP16.31■□□□□ 0.2
GPC1-207ENST00000466624 PKN3Q6P5Z2 889 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 LINGO4Q6UY18 593 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 ARHGAP36Q6ZRI8 547 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 NYAP1Q6ZVC0 841 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 SLC13A5Q86YT5 568 aaPredicted RBP16.31■□□□□ 0.2
GPC1-207ENST00000466624 TMEM105Q8N8V8 129 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 ATP11CQ8NB49 1132 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 FRS2Q8WU20 508 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 NAPGQ99747 312 aaPredicted RBP16.31■□□□□ 0.2
GPC1-207ENST00000466624 FBRSQ9HAH7 460 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 UBA2Q9UBT2 640 aaPredicted RBP16.31■□□□□ 0.2
GPC1-207ENST00000466624 SNX12Q9UMY4 172 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 CUL9Q8IWT3 2517 aa16.31■□□□□ 0.2
GPC1-207ENST00000466624 EDDM13A0A1B0GTR0 161 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 CTAGE9A4FU28 777 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 ZNF189O75820 626 aaPredicted RBP16.3■□□□□ 0.2
GPC1-207ENST00000466624 PEX11BO96011 259 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 MT-CO1P00395 513 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 TUBB4AP04350 444 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 EPHX1P07099 455 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 C7P10643 843 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 HOXB2P14652 356 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 PECAM1P16284 738 aaPredicted RBP16.3■□□□□ 0.2
GPC1-207ENST00000466624 TCP1P17987 556 aaKnown RBP16.3■□□□□ 0.2
GPC1-207ENST00000466624 PRKCHP24723 683 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 CCR3P51677 355 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 NUBP1P53384 320 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 MTAPQ13126 283 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 STARD3Q14849 445 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 LLGL1Q15334 1064 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 DLG2Q15700 870 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 CRY1Q16526 586 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 TMEM31Q5JXX7 168 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 CCDC181Q5TID7 509 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 C22orf39Q6P5X5 142 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 NPNTQ6UXI9 565 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 PLPP6Q8IY26 295 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 RASGEF1CQ8N431 466 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 CCDC33Q8N5R6 958 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 PCDH20Q8N6Y1 951 aaKnown RBP16.3■□□□□ 0.2
GPC1-207ENST00000466624 NETO2Q8NC67 525 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 NSMCE1Q8WV22 266 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms