RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 NIF3L1Q9GZT8 377 aa9.47□□□□□ -0.89
ABCF3-205ENST00000466416 SYNDIG1Q9H7V2 258 aa9.47□□□□□ -0.89
ABCF3-205ENST00000466416 FARP1Q9Y4F1 1045 aaPredicted RBP9.47□□□□□ -0.89
ABCF3-205ENST00000466416 PRAMEF33A0A0G2JMD5 474 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 POM121BA6NF01 834 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 D6RAR5 112 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 LMO7DNF2Z398 122 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 PRAMEF10O60809 474 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 AGFG2O95081 481 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 PCDH8O95206 1070 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 ANXA6P08133 673 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 ELAVL4P26378 380 aaKnown RBP9.46□□□□□ -0.9
ABCF3-205ENST00000466416 OXCT1P55809 520 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 ADIGQ0VDE8 80 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 TMEM259Q4ZIN3 620 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 ZNF394Q53GI3 561 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 FHL5Q5TD97 284 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 SLC9A9Q8IVB4 645 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 SIX6OS1Q8N1H7 587 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 CFAP52Q8N1V2 620 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 SLC4A11Q8NBS3 891 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 CCDC150Q8NCX0 1101 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 MYEOVQ96EZ4 313 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 FAXDC2Q96IV6 333 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 EPAS1Q99814 870 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 SLC17A9Q9BYT1 436 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 FOXP3Q9BZS1 431 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 UPF2Q9HAU5 1272 aaKnown RBP9.46□□□□□ -0.9
ABCF3-205ENST00000466416 APOBEC3GQ9HC16 384 aaKnown RBP9.46□□□□□ -0.9
ABCF3-205ENST00000466416 CNGB3Q9NQW8 809 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 KBTBD4Q9NVX7 518 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 DMAC2Q9NW81 257 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 KLF15Q9UIH9 416 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 ZFR2Q9UPR6 939 aaKnown RBP9.46□□□□□ -0.9
ABCF3-205ENST00000466416 LOXL2Q9Y4K0 774 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 CLIC4Q9Y696 253 aa9.46□□□□□ -0.9
ABCF3-205ENST00000466416 RP1L1Q8IWN7 2480 aaPredicted RBP9.46□□□□□ -0.9
ABCF3-205ENST00000466416 A0A087X0B3 334 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 CASC3O15234 703 aaKnown RBP9.45□□□□□ -0.9
ABCF3-205ENST00000466416 ATP1A2P50993 1020 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 RAD23BP54727 409 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 ADKP55263 362 aaKnown RBP9.45□□□□□ -0.9
ABCF3-205ENST00000466416 DAOAP59103 153 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 RPS21P63220 83 aaKnown RBP9.45□□□□□ -0.9
ABCF3-205ENST00000466416 CCL7P80098 99 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 NUCB2P80303 420 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 NNTQ13423 1086 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 PDE1CQ14123 709 aaPredicted RBP9.45□□□□□ -0.9
ABCF3-205ENST00000466416 DLG2Q15700 870 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 TMEM164Q5U3C3 297 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 ZSCAN30Q86W11 494 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 PDILTQ8N807 584 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 TMIEQ8NEW7 156 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 OR6C4Q8NGE1 309 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 GPBAR1Q8TDU6 330 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 SSC4DQ8WTU2 575 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 SCG3Q8WXD2 468 aaKnown RBP9.45□□□□□ -0.9
ABCF3-205ENST00000466416 IRGQQ8WZA9 623 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 USP7Q93009 1102 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 RNF34Q969K3 372 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 FEM1CQ96JP0 617 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 PHF12Q96QT6 1004 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 CMKLR1Q99788 373 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 NUCKS1Q9H1E3 243 aaKnown RBP9.45□□□□□ -0.9
ABCF3-205ENST00000466416 CUEDC2Q9H467 287 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 ZNF71Q9NQZ8 489 aaPredicted RBP9.45□□□□□ -0.9
ABCF3-205ENST00000466416 DYRK4Q9NR20 520 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 HESX1Q9UBX0 185 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 SLC25A13Q9UJS0 675 aa9.45□□□□□ -0.9
ABCF3-205ENST00000466416 A0A1W2PQM1 296 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 VPS37CA5D8V6 355 aaPredicted RBP9.44□□□□□ -0.9
ABCF3-205ENST00000466416 STMND1H3BQB6 276 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 TULP2O00295 520 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 KPNA3O00505 521 aaPredicted RBP9.44□□□□□ -0.9
ABCF3-205ENST00000466416 FPGTO14772 594 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 YY2O15391 372 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 CAPN5O15484 640 aaPredicted RBP9.44□□□□□ -0.9
ABCF3-205ENST00000466416 MTSS1O43312 755 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 GCATO75600 419 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 PAK4O96013 591 aaPredicted RBP9.44□□□□□ -0.9
ABCF3-205ENST00000466416 PDGFRAP16234 1089 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 ITIH1P19827 911 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 POU3F2P20265 443 aaPredicted RBP9.44□□□□□ -0.9
ABCF3-205ENST00000466416 ZFP36L1Q07352 338 aaKnown RBP9.44□□□□□ -0.9
ABCF3-205ENST00000466416 BST2Q10589 180 aaKnown RBP9.44□□□□□ -0.9
ABCF3-205ENST00000466416 KLRB1Q12918 225 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 EIF2B5Q13144 721 aaKnown RBP9.44□□□□□ -0.9
ABCF3-205ENST00000466416 PTK2BQ14289 1009 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 PRRT3Q5FWE3 981 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 SEL1L3Q68CR1 1132 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 KIAA1161Q6NSJ0 714 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 LVRNQ6Q4G3 990 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 UNC13DQ70J99 1090 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 ERN2Q76MJ5 926 aaKnown RBP9.44□□□□□ -0.9
ABCF3-205ENST00000466416 TICAM1Q8IUC6 712 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 LGI2Q8N0V4 545 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 ARL10Q8N8L6 244 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 TATDN2Q93075 761 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 PPP1R13BQ96KQ4 1090 aa9.44□□□□□ -0.9
ABCF3-205ENST00000466416 FCRL2Q96LA5 508 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms