RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 LDLRAP1Q5SW96 308 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 KLHL24Q6TFL4 600 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 CYP4Z1Q86W10 505 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 DNAAF5Q86Y56 855 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 SIX5Q8N196 739 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 SPATA17Q96L03 361 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 TMEM121Q9BTD3 319 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 NRDE2Q9H7Z3 1164 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 PALMDQ9NP74 551 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 RAB6BQ9NRW1 208 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 OBP2AQ9NY56 170 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 CFL2Q9Y281 166 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 PCDHGA4Q9Y5G9 962 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 SNTNA6NMZ2 147 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 NDUFA10O95299 355 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 RHOP08100 348 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 FGRP09769 529 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 ZNF865P0CJ78 1059 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-205ENST00000465950 TACR2P21452 398 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
SCAF11-205ENST00000465950 PLGLB1Q02325 96 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 MLF2Q15773 248 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-205ENST00000465950 RASIP1Q5U651 963 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 CENPPQ6IPU0 288 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 FAM131BQ86XD5 332 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 PSTKQ8IV42 348 aaKnown RBP9.6□□□□□ -0.87
SCAF11-205ENST00000465950 CCNYL1Q8N7R7 359 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 GDPD5Q8WTR4 605 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 MYLIPQ8WY64 445 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 DHX33Q9H6R0 707 aaKnown RBP9.6□□□□□ -0.87
SCAF11-205ENST00000465950 FBXL12Q9NXK8 326 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 FBXL5Q9UKA1 691 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 A0A1W2PRU2 124 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 F8W810 466 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 CTIFO43310 598 aaKnown RBP9.6□□□□□ -0.87
SCAF11-205ENST00000465950 BUB1BO60566 1050 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-205ENST00000465950 FGF1P05230 155 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 GALTP07902 379 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 RBP3P10745 1247 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 CDH2P19022 906 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-205ENST00000465950 RRADP55042 308 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 ATXN7L2Q5T6C5 722 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-205ENST00000465950 BRAT1Q6PJG6 821 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 FAM228AQ86W67 206 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 DDIASQ8IXT1 998 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 TCAIMQ8N3R3 496 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 ELMO1Q92556 727 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 PLEKHA8Q96JA3 519 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 C5orf34Q96MH7 638 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 NDC1Q9BTX1 674 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 SYBUQ9NX95 663 aa9.6□□□□□ -0.87
SCAF11-205ENST00000465950 A0A1B0GUA9 196 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 A0A1W2PQJ5 194 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 TM9SF1O15321 606 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 CYP1A1P04798 512 aaPredicted RBP9.59□□□□□ -0.87
SCAF11-205ENST00000465950 WASP42768 502 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 TMEM119Q4V9L6 283 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 P4HA3Q7Z4N8 544 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 EDAQ92838 391 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 FICDQ9BVA6 458 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 CCDC134Q9H6E4 229 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 VPS45Q9NRW7 570 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 H2AFY2Q9P0M6 372 aaPredicted RBP9.59□□□□□ -0.87
SCAF11-205ENST00000465950 B4GALT7Q9UBV7 327 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 RNF112Q9ULX5 631 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 RPP40O75818 363 aaKnown RBP9.59□□□□□ -0.87
SCAF11-205ENST00000465950 SNAI1O95863 264 aaPredicted RBP9.59□□□□□ -0.87
SCAF11-205ENST00000465950 JCHAINP01591 159 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 CNTFP26441 200 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 ARL2P36404 184 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 MPP3Q13368 585 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 LAPTM5Q13571 262 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 USP53Q70EK8 1073 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 SNX32Q86XE0 403 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 SLC9A9Q8IVB4 645 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 TRIM59Q8IWR1 403 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 GALNT15Q8N3T1 639 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 COPS8Q99627 209 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 ELOVL6Q9H5J4 265 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 WDR26Q9H7D7 661 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 HPSEQ9Y251 543 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 HEPACAM2A8MVW5 462 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 TMEM150CB9EJG8 249 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 GPR37L1O60883 481 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 FGGP02679 453 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 SRPRAP08240 638 aaKnown RBP9.59□□□□□ -0.87
SCAF11-205ENST00000465950 TPH1P17752 444 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 SOAT1P35610 550 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 SKIV2L2P42285 1042 aaKnown RBP9.59□□□□□ -0.87
SCAF11-205ENST00000465950 RAB33AQ14088 237 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 SEZ6Q53EL9 994 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 CST9Q5W186 159 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 GALNT18Q6P9A2 607 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 TFAP2DQ7Z6R9 452 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 GRAMD1CQ8IYS0 662 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 SIDT2Q8NBJ9 832 aaKnown RBP9.59□□□□□ -0.87
SCAF11-205ENST00000465950 ATAD1Q8NBU5 361 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 PDZD7Q9H5P4 517 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 SIGLEC1Q9BZZ2 1709 aa9.59□□□□□ -0.87
SCAF11-205ENST00000465950 ASTN1O14525 1302 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms