RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 FAM90A15PP0C7V4 464 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 FAM90A14PP0C7W9 464 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 THPOP40225 353 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 AK2P54819 239 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 CDH12P55289 794 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 TRAF3Q13114 568 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 WBP2NLQ6ICG8 309 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 KIAA1324Q6UXG2 1013 aaKnown RBP5.44□□□□□ -1.54
SMC4-205ENST00000465563 TMEM163Q8TC26 289 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 TMEM248Q9NWD8 314 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 CDH22Q9UJ99 828 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 LZTS1Q9Y250 596 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 SCN5AQ14524 2016 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 C17orf102A2RUQ5 167 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 TMEM247A6NEH6 219 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 EFCAB8A8MWE9 144 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 HSPB6O14558 160 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 ENO3P13929 434 aaPredicted RBP5.43□□□□□ -1.54
SMC4-205ENST00000465563 PRKCHP24723 683 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 TYK2P29597 1187 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 TUBA1BP68363 451 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 POU5F1BQ06416 359 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 CCDC181Q5TID7 509 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 SYTL1Q8IYJ3 562 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 ZDHHC23Q8IYP9 409 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 MIGA1Q8NAN2 632 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 IGSF21Q96ID5 467 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 INPP4AQ96PE3 977 aaPredicted RBP5.43□□□□□ -1.54
SMC4-205ENST00000465563 TRIM31Q9BZY9 425 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 OCIAD1Q9NX40 245 aa5.43□□□□□ -1.54
SMC4-205ENST00000465563 GRM8O00222 908 aa5.42□□□□□ -1.54
SMC4-205ENST00000465563 KRT36O76013 467 aa5.42□□□□□ -1.54
SMC4-205ENST00000465563 SNRNP70P08621 437 aaKnown RBP5.42□□□□□ -1.54
SMC4-205ENST00000465563 ABCB4P21439 1286 aa5.42□□□□□ -1.54
SMC4-205ENST00000465563 GSTM2P28161 218 aa5.42□□□□□ -1.54
SMC4-205ENST00000465563 CDK7P50613 346 aa5.42□□□□□ -1.54
SMC4-205ENST00000465563 CDK18Q07002 472 aa5.42□□□□□ -1.54
SMC4-205ENST00000465563 ALKBH1Q13686 389 aaKnown RBP5.42□□□□□ -1.54
SMC4-205ENST00000465563 ATPAF1Q5TC12 328 aaPredicted RBP5.42□□□□□ -1.54
SMC4-205ENST00000465563 MTFR2Q6P444 385 aa5.42□□□□□ -1.54
SMC4-205ENST00000465563 KSR2Q6VAB6 950 aa5.42□□□□□ -1.54
SMC4-205ENST00000465563 MON1BQ7L1V2 547 aa5.42□□□□□ -1.54
SMC4-205ENST00000465563 FRG2BQ96QU4 278 aa5.42□□□□□ -1.54
SMC4-205ENST00000465563 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMC4-205ENST00000465563 A0A0B4J293 547 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 AQP12BA6NM10 295 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 RNMTO43148 476 aaKnown RBP5.41□□□□□ -1.54
SMC4-205ENST00000465563 HEXIM1O94992 359 aaKnown RBP5.41□□□□□ -1.54
SMC4-205ENST00000465563 NBPF7P0C2Y1 421 aaPredicted RBP5.41□□□□□ -1.54
SMC4-205ENST00000465563 FCGR2AP12318 317 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 CLCNKBP51801 687 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 DLX5P56178 289 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 GRSF1Q12849 480 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMC4-205ENST00000465563 RNF144BQ7Z419 303 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 VPS52Q8N1B4 723 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 DEPTORQ8TB45 409 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 HDAC7Q8WUI4 952 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 FAR1Q8WVX9 515 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 IFT27Q9BW83 186 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 IL25Q9H293 177 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 SEL1LQ9UBV2 794 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 PHTF1Q9UMS5 762 aa5.41□□□□□ -1.54
SMC4-205ENST00000465563 MST1RQ04912 1400 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 IGHV4-28A0A0C4DH34 117 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 LINC01553A4QN01 128 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 EYA2O00167 538 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 ITM2AO43736 263 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 SOCS5O75159 536 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 SERPINI2O75830 405 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 MMP3P08254 477 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 DAOP14920 347 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 KRTAP24-1Q3LI83 254 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 SYTL3Q4VX76 610 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 ATG9BQ674R7 924 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 FAM71BQ8TC56 605 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 STYXQ8WUJ0 223 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 KCNJ9Q92806 393 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 HES6Q96HZ4 224 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 MYD88Q99836 296 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 SLC25A33Q9BSK2 321 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 BRD8Q9H0E9 1235 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 SLC22A11Q9NSA0 550 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 OSGIN2Q9Y236 505 aa5.4□□□□□ -1.54
SMC4-205ENST00000465563 IGLV5-52A0A0A0MRZ9 124 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 BUB3O43684 328 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 TCEA1P23193 301 aaKnown RBP5.39□□□□□ -1.55
SMC4-205ENST00000465563 RFC1P35251 1148 aaPredicted RBP5.39□□□□□ -1.55
SMC4-205ENST00000465563 TECP42680 631 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 BNC1Q01954 994 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 STARD3Q14849 445 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 ZRSR1Q15695 479 aaKnown RBP5.39□□□□□ -1.55
SMC4-205ENST00000465563 GXYLT1Q4G148 440 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 EFHC1Q5JVL4 640 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 TMEM268Q5VZI3 342 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 NFRKBQ6P4R8 1299 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 SERPINA11Q86U17 422 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 RFLNBQ8N5W9 214 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 TEX45Q8NA69 505 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 SLC2A12Q8TD20 617 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 TMEM41AQ96HV5 264 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms