RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 STK19P49842 368 aaPredicted RBP17.3■□□□□ 0.36
USP39-211ENST00000465282 ZBTB16Q05516 673 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 TCF15Q12870 199 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 BYSLQ13895 437 aaKnown RBP17.3■□□□□ 0.36
USP39-211ENST00000465282 DLG2Q15700 870 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 ACCSLQ4AC99 568 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 TMCO4Q5TGY1 634 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 KIAA1211LQ6NV74 962 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 WDR5BQ86VZ2 330 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 ZNF354CQ86Y25 554 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 ARHGAP12Q8IWW6 846 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 PLPP6Q8IY26 295 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 UBL4BQ8N7F7 174 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 ZBTB44Q8NCP5 570 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 PRSS33Q8NF86 280 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.3■□□□□ 0.36
USP39-211ENST00000465282 FRS2Q8WU20 508 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 ATRIPQ8WXE1 791 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 SLC39A8Q9C0K1 460 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 KCNF1Q9H3M0 494 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 PRSS16Q9NQE7 514 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 KLHL11Q9NVR0 708 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 EFR3BQ9Y2G0 817 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 FARP1Q9Y4F1 1045 aaPredicted RBP17.3■□□□□ 0.36
USP39-211ENST00000465282 RAD54BQ9Y620 910 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 CACNA1HO95180 2353 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 TTC34A8MYJ7 566 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 AXIN1O15169 862 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 ALOX15BO15296 676 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 PRAMEF11O60813 436 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 RNASEH1O60930 286 aaKnown RBP17.29■□□□□ 0.36
USP39-211ENST00000465282 MT-CO1P00395 513 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 HLA-EP13747 358 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 GLDCP23378 1020 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 CETN2P41208 172 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 PAPOLAP51003 745 aaKnown RBP17.29■□□□□ 0.36
USP39-211ENST00000465282 RWDD2BP57060 319 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 IL10RBQ08334 325 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 SFSWAPQ12872 951 aaKnown RBP17.29■□□□□ 0.36
USP39-211ENST00000465282 TFDP2Q14188 446 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 ELAVL3Q14576 367 aaKnown RBP17.29■□□□□ 0.36
USP39-211ENST00000465282 TFDP3Q5H9I0 405 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 C9orf64Q5T6V5 341 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 ANO7Q6IWH7 933 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 TSSK4Q6SA08 328 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 DSG4Q86SJ6 1040 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 PCDH20Q8N6Y1 951 aaKnown RBP17.29■□□□□ 0.36
USP39-211ENST00000465282 NPWQ8N729 165 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 TRIM58Q8NG06 486 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 ALS2CR12Q96Q35 445 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 LZTFL1Q9NQ48 299 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 ETNK2Q9NVF9 386 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 POLR3BQ9NW08 1133 aaPredicted RBP17.29■□□□□ 0.36
USP39-211ENST00000465282 BCCIPQ9P287 314 aaKnown RBP eCLIP17.29■□□□□ 0.36
USP39-211ENST00000465282 SCML1Q9UN30 329 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 CAPN6Q9Y6Q1 641 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 SHROOM3Q8TF72 1996 aa17.29■□□□□ 0.36
USP39-211ENST00000465282 SIN3BO75182 1162 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 ZNF217O75362 1048 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 GABRG2P18507 467 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 MX2P20592 715 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 CDKN2BP42772 138 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 PEX5P50542 639 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 RFTN1Q14699 578 aaPredicted RBP17.28■□□□□ 0.36
USP39-211ENST00000465282 PPP2R5EQ16537 467 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 NCBP2-AS2Q69YL0 99 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 SLC9A4Q6AI14 798 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 MFSD7Q6UXD7 560 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 LINGO4Q6UY18 593 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 SPOCD1Q6ZMY3 1216 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 TMPRSS6Q8IU80 811 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 PQLC3Q8N755 202 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 MDGA1Q8NFP4 955 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 HMGB4Q8WW32 186 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 PTPRN2Q92932 1015 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 RNF25Q96BH1 459 aaPredicted RBP17.28■□□□□ 0.36
USP39-211ENST00000465282 CELF6Q96J87 481 aaKnown RBP17.28■□□□□ 0.36
USP39-211ENST00000465282 MRGPRX1Q96LB2 322 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 ZNF599Q96NL3 588 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 RSPH9Q9H1X1 276 aaPredicted RBP17.28■□□□□ 0.36
USP39-211ENST00000465282 IPO11Q9UI26 975 aaKnown RBP17.28■□□□□ 0.36
USP39-211ENST00000465282 MUC6Q6W4X9 2439 aa17.28■□□□□ 0.36
USP39-211ENST00000465282 H0Y858 1186 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 DFFAO00273 331 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 APOL1O14791 398 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 MCF2LO15068 1137 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 CD160O95971 181 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 PTPN7P35236 360 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 RECQLP46063 649 aaPredicted RBP17.27■□□□□ 0.36
USP39-211ENST00000465282 NR2C2P49116 596 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 COPAP53621 1224 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 USP39Q53GS9 565 aaKnown RBP17.27■□□□□ 0.36
USP39-211ENST00000465282 C22orf39Q6P5X5 142 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 BZW1Q7L1Q6 419 aaKnown RBP17.27■□□□□ 0.36
USP39-211ENST00000465282 C11orf74Q86VG3 221 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 PGBD3Q8N328 593 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 ZNF366Q8N895 744 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 OR8D1Q8WZ84 308 aa17.27■□□□□ 0.36
USP39-211ENST00000465282 PRCCQ92733 491 aaPredicted RBP17.27■□□□□ 0.36
USP39-211ENST00000465282 KRT35Q92764 455 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms