RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, human

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP9X-204	ENST00000463829	FAR1	Q8WVX9	515 aa		4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	CNOT9	Q92600	299 aa	Known RBP	4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	CENPI	Q92674	756 aa	Predicted RBP	4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	PPM1M	Q96MI6	270 aa		4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	WDR83	Q9BRX9	315 aa	Known RBP	4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	MROH8	Q9H579	483 aa		4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	AAMDC	Q9H7C9	122 aa		4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	UBN1	Q9NPG3	1134 aa		4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	HDAC6	Q9UBN7	1215 aa		4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	ZNF69	Q9UC07	566 aa		4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	OSGIN2	Q9Y236	505 aa		4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	TMEM98	Q9Y2Y6	226 aa		4.6	□□□□□ -1.67
USP9X-204	ENST00000463829	GOLGA6L10	A0A0M3HER8	536 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.59	□□□□□ -1.67
USP9X-204	ENST00000463829		A6NLC8	198 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	TLX3	O43711	291 aa	Predicted RBP	4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	CBX6	O95503	412 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	DDAH2	O95865	285 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	CYP19A1	P11511	503 aa	Predicted RBP	4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	SLC16A2	P36021	539 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	MST1R	Q04912	1400 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.59	□□□□□ -1.67	7e-7	■■□□□ 11.9
USP9X-204	ENST00000463829	CAMK1	Q14012	370 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	GPR68	Q15743	365 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	SLC18A3	Q16572	532 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	BAK1	Q16611	211 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	SMTNL2	Q2TAL5	461 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	NAPEPLD	Q6IQ20	393 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	KDELC2	Q7Z4H8	507 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	FAM185A	Q8N0U4	392 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	GHDC	Q8N2G8	530 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	TNIP2	Q8NFZ5	429 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	ZCCHC10	Q8TBK6	192 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	RAB40A	Q8WXH6	277 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	ST8SIA4	Q92187	359 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	RPL36AL	Q969Q0	106 aa	Known RBP	4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	EME1	Q96AY2	570 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	ZFYVE19	Q96K21	471 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	CLSTN3	Q9BQT9	956 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	FUZ	Q9BT04	418 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	TRMO	Q9BU70	441 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	JMJD4	Q9H9V9	463 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	SPAG4	Q9NPE6	437 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	RNF146	Q9NTX7	359 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	FBXO40	Q9UH90	709 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	ICK	Q9UPZ9	632 aa		4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.59	□□□□□ -1.67
USP9X-204	ENST00000463829	TRBV5-7	A0A0A0MS05	114 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	WDR91	A4D1P6	747 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	KIF1C	O43896	1103 aa	Known RBP	4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	TMCC1	O94876	653 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	IL1A	P01583	271 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	LIFR	P42702	1097 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	PTPN9	P43378	593 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	RPP30	P78346	268 aa	Known RBP	4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	MTX1	Q13505	466 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	RBMS2	Q15434	407 aa	Known RBP	4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	ENTPD8	Q5MY95	495 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	C6orf10	Q5SRN2	563 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	PXDC1	Q5TGL8	231 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	SHC4	Q6S5L8	630 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	WDR5B	Q86VZ2	330 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	TCP11L2	Q8N4U5	519 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	SLC25A41	Q8N5S1	370 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	DPP10	Q8N608	796 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	NANOGP1	Q8N7R0	232 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	DNAAF1	Q8NEP3	725 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	MPLKIP	Q8TAP9	179 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	DENND1A	Q8TEH3	1009 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	RUFY2	Q8WXA3	655 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	HSPH1	Q92598	858 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	RNF125	Q96EQ8	232 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	APOPT1	Q96IL0	206 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	TMEM79	Q9BSE2	394 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	PAIP1	Q9H074	479 aa	Known RBP	4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	INTS2	Q9H0H0	1204 aa	Known RBP	4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	LMAN2L	Q9H0V9	348 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	EPHX3	Q9H6B9	360 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	PNRC2	Q9NPJ4	139 aa	Known RBP	4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	BEX4	Q9NWD9	120 aa	Predicted RBP	4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	ZDHHC7	Q9NXF8	308 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	GRHL1	Q9NZI5	618 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	MSRB1	Q9NZV6	116 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	ARHGAP26	Q9UNA1	814 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	CNPY2	Q9Y2B0	182 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	CLDN16	Q9Y5I7	305 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	SLC4A4	Q9Y6R1	1079 aa		4.58	□□□□□ -1.68
USP9X-204	ENST00000463829	TARSL2	A2RTX5	802 aa	Known RBP	4.57	□□□□□ -1.68
USP9X-204	ENST00000463829	GAGE10	A6NGK3	116 aa		4.57	□□□□□ -1.68
USP9X-204	ENST00000463829	DNAJC9-AS1	A6NH13	148 aa		4.57	□□□□□ -1.68
USP9X-204	ENST00000463829	ZNF814	B7Z6K7	855 aa		4.57	□□□□□ -1.68
USP9X-204	ENST00000463829	TEX22	C9J3V5	150 aa		4.57	□□□□□ -1.68
USP9X-204	ENST00000463829	PER2	O15055	1255 aa		4.57	□□□□□ -1.68
USP9X-204	ENST00000463829	RNMT	O43148	476 aa	Known RBP	4.57	□□□□□ -1.68
USP9X-204	ENST00000463829	TOP3B	O95985	862 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms