RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 TUBA4AP68366 448 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 PNPT1Q8TCS8 783 aaKnown RBP16.04■□□□□ 0.16
SMC4-204ENST00000462787 MRPL57Q9BQC6 102 aaKnown RBP16.04■□□□□ 0.16
SMC4-204ENST00000462787 TRIM39Q9HCM9 518 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 SLC38A7Q9NVC3 462 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 TBCCD1Q9NVR7 557 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 ZNF70Q9UC06 446 aaPredicted RBP16.04■□□□□ 0.16
SMC4-204ENST00000462787 SLC7A2P52569 658 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 HPCAP84074 193 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 KIAA1841Q6NSI8 718 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 CCDC149Q6ZUS6 474 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 RBM12BQ8IXT5 1001 aaKnown RBP16.04■□□□□ 0.16
SMC4-204ENST00000462787 SIX5Q8N196 739 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 SCAIQ8N9R8 606 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 OTUD5Q96G74 571 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 HSD17B14Q9BPX1 270 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 DYRK4Q9NR20 520 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 CLDN25C9JDP6 229 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 LTA4HP09960 611 aaKnown RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 TSNQ15631 228 aaKnown RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 NADK2Q4G0N4 442 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 DENND5AQ6IQ26 1287 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 KLHL17Q6TDP4 642 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 ZNF605Q86T29 641 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 TTLL6Q8N841 843 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 ACER1Q8TDN7 264 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 UTP15Q8TED0 518 aaKnown RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 FAM163AQ96GL9 167 aaPredicted RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 ZNF670Q9BS34 389 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 EPB41L1Q9H4G0 881 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 TIPRLO75663 272 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 TSPAN9O75954 239 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 PENKP01210 267 aaPredicted RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 SLC2A3P11169 496 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 SLC2A4P14672 509 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 FNBP1LQ5T0N5 605 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 PTAR1Q7Z6K3 402 aaPredicted RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 ZBTB46Q86UZ6 589 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 OR2T34Q8NGX1 318 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 OR2T3Q8NH03 318 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 NPAS2Q99743 824 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 NUDT5Q9UKK9 219 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 CRTAMO95727 393 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 NDST1P52848 882 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 SOX10P56693 466 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 CACNB2Q08289 660 aaPredicted RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 MINDY2Q8NBR6 621 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 SYTL5Q8TDW5 730 aaPredicted RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 DQX1Q8TE96 717 aaKnown RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 ZDHHC15Q96MV8 337 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 PDCD2LQ9BRP1 358 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 RPRD1BQ9NQG5 326 aaKnown RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 ERAP1Q9NZ08 941 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 RAPGEFL1Q9UHV5 662 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 SAGE2PA6NJ88 616 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 KCNQ2O43526 872 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 NBNO60934 754 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 TCF7P36402 384 aaPredicted RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 SLC26A3P40879 764 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 ITGA7Q13683 1181 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 INO80DQ53TQ3 878 aaPredicted RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 MZT2BQ6NZ67 158 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 CRTC3Q6UUV7 619 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 CHST13Q8NET6 341 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 C12orf65Q9H3J6 166 aaKnown RBP16.03■□□□□ 0.16
SMC4-204ENST00000462787 ENTPD7Q9NQZ7 604 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 SNCAIPQ9Y6H5 919 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
SMC4-204ENST00000462787 CNTNAP4Q9C0A0 1308 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.02■□□□□ 0.16
SMC4-204ENST00000462787 PLA2G6O60733 806 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 KRT6AP02538 564 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 ACADVLP49748 655 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 NFIAQ12857 509 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 ZACNQ401N2 412 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 PROSER1Q86XN7 944 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 TNS4Q8IZW8 715 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 RGS18Q9NS28 235 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 F8W810 466 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 MEIS2O14770 477 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 NRP2O60462 931 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 TNFRSF21O75509 655 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 IL1R1P14778 569 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 POU1F1P28069 291 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 ETFBP38117 255 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 ZNF135P52742 658 aaPredicted RBP16.02■□□□□ 0.16
SMC4-204ENST00000462787 LSM3P62310 102 aaKnown RBP16.02■□□□□ 0.16
SMC4-204ENST00000462787 VPS72Q15906 364 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 RALGPS1Q5JS13 557 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 LINC00116Q8NCU8 138 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 TADA1Q96BN2 335 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 TBL1YQ9BQ87 522 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 LRFN2Q9ULH4 789 aa16.02■□□□□ 0.16
SMC4-204ENST00000462787 WBP11Q9Y2W2 641 aaKnown RBP16.02■□□□□ 0.16
SMC4-204ENST00000462787 KCNK1O00180 336 aa16.02■□□□□ 0.15
SMC4-204ENST00000462787 PSMB4P28070 264 aa16.02■□□□□ 0.15
SMC4-204ENST00000462787 PLK1P53350 603 aa16.02■□□□□ 0.15
SMC4-204ENST00000462787 PGS1Q32NB8 556 aa16.02■□□□□ 0.15
SMC4-204ENST00000462787 TMEM161BQ8NDZ6 487 aa16.02■□□□□ 0.15
SMC4-204ENST00000462787 OR52K1Q8NGK4 314 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms