RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ARHGAP20Q9P2F6 1191 aa5.98□□□□□ -1.45
VPS36-202ENST00000462289 KLHL3Q9UH77 587 aa5.98□□□□□ -1.45
VPS36-202ENST00000462289 CHORDC1Q9UHD1 332 aaPredicted RBP5.98□□□□□ -1.45
VPS36-202ENST00000462289 FBXO10Q9UK96 956 aa5.98□□□□□ -1.45
VPS36-202ENST00000462289 MAGED2Q9UNF1 606 aaPredicted RBP5.98□□□□□ -1.45
VPS36-202ENST00000462289 HBS1LQ9Y450 684 aaKnown RBP5.98□□□□□ -1.45
VPS36-202ENST00000462289 BZW2Q9Y6E2 419 aaKnown RBP5.98□□□□□ -1.45
VPS36-202ENST00000462289 OTOGLQ3ZCN5 2332 aa5.98□□□□□ -1.45
VPS36-202ENST00000462289 C2CD4BA6NLJ0 364 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 KCNU1A8MYU2 1149 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 I6L893 689 aaPredicted RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 LEFTY2O00292 366 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 RGS13O14921 159 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 IRAK2O43187 625 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 HOXC11O43248 304 aaPredicted RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 NARSO43776 548 aaKnown RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 HSF2BPO75031 334 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 MFAP3LO75121 409 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 DAB1O75553 588 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 TBX18O95935 607 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 PENKP01210 267 aaPredicted RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 CCDC172P0C7W6 258 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 RARGP13631 454 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 CASP14P31944 242 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 KRT9P35527 623 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 ATP5C1P36542 298 aaKnown RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 AVPR1AP37288 418 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 EIF2DP41214 584 aaKnown RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 MATKP42679 507 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 RGS7P49802 495 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 ZNF75DP51815 510 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 YWHAZP63104 245 aaKnown RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 PFKPQ01813 784 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 SLC6A3Q01959 620 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 PDGFRLQ15198 375 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 TAF5Q15542 800 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 C5orf22Q49AR2 442 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 SYPL2Q5VXT5 272 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 CWF19L1Q69YN2 538 aaKnown RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 PLEKHA7Q6IQ23 1121 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 PPP1R2P3Q6NXS1 205 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 C1orf228Q6PIY5 440 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 FAM183BPQ6ZVS7 135 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 ERMP1Q7Z2K6 904 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 CREBRFQ8IUR6 639 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 ZNF683Q8IZ20 524 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 PHACTR4Q8IZ21 702 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 TC2NQ8N9U0 490 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 GOLM1Q8NBJ4 401 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 C3orf20Q8ND61 904 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 DQX1Q8TE96 717 aaKnown RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 SH3RF2Q8TEC5 729 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 FNIP1Q8TF40 1166 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 NDRG1Q92597 394 aaKnown RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 C18orf8Q96DM3 657 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 LMLNQ96KR4 655 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 FCRL2Q96LA5 508 aaPredicted RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 AGPAT1Q99943 283 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 KXD1Q9BQD3 176 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 TRIM62Q9BVG3 475 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 TRMT61BQ9BVS5 477 aaKnown RBP5.97□□□□□ -1.45
VPS36-202ENST00000462289 HDAC8Q9BY41 377 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 MIS12Q9H081 205 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 EPHX3Q9H6B9 360 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 POPDC2Q9HBU9 364 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 LRRC4Q9HBW1 653 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 RRN3Q9NYV6 651 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 CALCOCO1Q9P1Z2 691 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 WDR35Q9P2L0 1181 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS36-202ENST00000462289 CPQQ9Y646 472 aa5.97□□□□□ -1.45
VPS36-202ENST00000462289 ZNF292O60281 2723 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 RIF1Q5UIP0 2472 aaKnown RBP5.96□□□□□ -1.46
VPS36-202ENST00000462289 SIGLEC16A6NMB1 481 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 NOTOA8MTQ0 251 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 PES1O00541 588 aaKnown RBP5.96□□□□□ -1.46
VPS36-202ENST00000462289 TRDMT1O14717 391 aaKnown RBP5.96□□□□□ -1.46
VPS36-202ENST00000462289 SLC9A3R1O14745 358 aaPredicted RBP5.96□□□□□ -1.46
VPS36-202ENST00000462289 CACNG3O60359 315 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 UBOX5O94941 541 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 ATE1O95260 518 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 CYP17A1P05093 508 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 SERPING1P05155 500 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 CKMP06732 381 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 TPM3P06753 285 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 RALAP11233 206 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 FLT3P36888 993 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 PTPN9P43378 593 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 RPS9P46781 194 aaKnown RBP5.96□□□□□ -1.46
VPS36-202ENST00000462289 CXCR3P49682 368 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 KPNA1P52294 538 aaPredicted RBP5.96□□□□□ -1.46
VPS36-202ENST00000462289 SNX16P57768 344 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 PITX1P78337 314 aaPredicted RBP5.96□□□□□ -1.46
VPS36-202ENST00000462289 COG7P83436 770 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 MTA1Q13330 715 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 PPP2R5DQ14738 602 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 TAF12Q16514 161 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 SLC25A52Q3SY17 297 aa5.96□□□□□ -1.46
VPS36-202ENST00000462289 FAM133BQ5BKY9 247 aaKnown RBP5.96□□□□□ -1.46
VPS36-202ENST00000462289 TMEM196Q5HYL7 178 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms