RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-204	ENST00000461522	MAGEH1	Q9H213	219 aa		4.65	□□□□□ -1.67
UBA3-204	ENST00000461522	PLAC1	Q9HBJ0	212 aa		4.65	□□□□□ -1.67
UBA3-204	ENST00000461522	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.65	□□□□□ -1.67
UBA3-204	ENST00000461522	PNRC2	Q9NPJ4	139 aa	Known RBP	4.65	□□□□□ -1.67
UBA3-204	ENST00000461522	RNF146	Q9NTX7	359 aa		4.65	□□□□□ -1.67
UBA3-204	ENST00000461522	FBXO4	Q9UKT5	387 aa		4.65	□□□□□ -1.67
UBA3-204	ENST00000461522	DTX4	Q9Y2E6	619 aa		4.65	□□□□□ -1.67
UBA3-204	ENST00000461522	SLIT1	O75093	1534 aa		4.65	□□□□□ -1.67
UBA3-204	ENST00000461522	PLEKHG1	Q9ULL1	1385 aa		4.65	□□□□□ -1.67
UBA3-204	ENST00000461522	MADD	Q8WXG6	1647 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	TBC1D3D	A0A087WVF3	549 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	TBC1D3I	A0A087WXS9	549 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	TBC1D3E	A0A087X179	549 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	TBC1D3K	A0A087X1G2	549 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	TBC1D3B	A6NDS4	549 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	SLC38A8	A6NNN8	435 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	TBC1D3L	B9A6J9	549 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	TBC1D3H	P0C7X1	549 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	ABCB4	P21439	1286 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	STAT1	P42224	750 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	KCNJ4	P48050	445 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	ROR2	Q01974	943 aa	Known RBP	4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	TBC1D3G	Q6DHY5	549 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	IL31	Q6EBC2	164 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	TBC1D3C	Q6IPX1	549 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	SLC16A12	Q6ZSM3	486 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	DCP1B	Q8IZD4	617 aa	Known RBP	4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	SLC25A41	Q8N5S1	370 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	ELP5	Q8TE02	316 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	CLEC4C	Q8WTT0	213 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	FAM84B	Q96KN1	310 aa	Predicted RBP	4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	MYD88	Q99836	296 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	ZNF304	Q9HCX3	659 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	HIF1AN	Q9NWT6	349 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	WNT16	Q9UBV4	365 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	UGGT1	Q9NYU2	1555 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	CAMSAP1	Q5T5Y3	1602 aa		4.64	□□□□□ -1.67
UBA3-204	ENST00000461522	CKAP5	Q14008	2032 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	CLEC18A	A5D8T8	446 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	FAM90A18P	A6NE21	464 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	FAM90A16P	A6NEW6	464 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	FAM90A9P	A6NNJ1	464 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	FAM90A5P	A8MXJ8	464 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	ASNA1	O43681	348 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	CAND2	O75155	1236 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	LARGE1	O95461	756 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	HOXC6	P09630	235 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	FAM90A15P	P0C7V4	464 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	FAM90A14P	P0C7W9	464 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	CPA1	P15085	419 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	KRTAP10-7	P60409	375 aa	Predicted RBP	4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	RHAG	Q02094	409 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	PICALM	Q13492	652 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	KEAP1	Q14145	624 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	ARL13A	Q5H913	290 aa	Predicted RBP	4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	ZNF569	Q5MCW4	686 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	GATAD2A	Q86YP4	633 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	KLB	Q86Z14	1044 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	PRR26	Q8N8Z3	221 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	KDM1B	Q8NB78	822 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	CLEC18C	Q8NCF0	446 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	RSC1A1	Q92681	617 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	PHF21B	Q96EK2	531 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	MED30	Q96HR3	178 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	SIN3A	Q96ST3	1273 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	NPAS1	Q99742	590 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	WDR77	Q9BQA1	342 aa	Predicted RBP	4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	SORBS1	Q9BX66	1292 aa	Known RBP	4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	TMEM120A	Q9BXJ8	343 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	DCLK3	Q9C098	648 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	CD93	Q9NPY3	652 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	MYO6	Q9UM54	1294 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	CNTN6	Q9UQ52	1028 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	PIK3C2B	O00750	1634 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	CLTC	Q00610	1675 aa	Known RBP	4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	RIMS2	Q9UQ26	1411 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	NCOA3	Q9Y6Q9	1424 aa		4.63	□□□□□ -1.67
UBA3-204	ENST00000461522	SCAF11	Q99590	1463 aa	Known RBP	4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	NRXN1	Q9ULB1	1477 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	SYNM	O15061	1565 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522		E9PCH4	1651 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	C3	P01024	1663 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	TRBV5-7	A0A0A0MS05	114 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	AQP12B	A6NM10	295 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	BECN2	A8MW95	431 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	INAFM1	C9JVW0	142 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	SPRY3	O43610	288 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	LCAT	P04180	440 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	ARSB	P15848	533 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	CHRNA5	P30532	468 aa		4.62	□□□□□ -1.67
UBA3-204	ENST00000461522	SLC16A2	P36021	539 aa		4.62	□□□□□ -1.67

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