RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SWI5Q1ZZU3 235 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 FBXO30Q8TB52 745 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 PTCD3Q96EY7 689 aaKnown RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 CELF6Q96J87 481 aaKnown RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 GPN1Q9HCN4 374 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 GNPTGQ9UJJ9 305 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 SSR3Q9UNL2 185 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 COG5Q9UP83 839 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 MTF2Q9Y483 593 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 ARHGEF5Q12774 1597 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 NRKQ7Z2Y5 1582 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 SLC28A1O00337 649 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 PGM3O95394 542 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 HOXC6P09630 235 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 ALOX5P09917 674 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 ITGA3P26006 1051 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 FMO4P31512 558 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 CLCN3P51790 818 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 FNDC3BQ53EP0 1204 aaKnown RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 OVOS1Q6IE37 1185 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 KBTBD2Q8IY47 623 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 CSGALNACT1Q8TDX6 532 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 KBTBD7Q8WVZ9 684 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF75CPQ92670 426 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 CPB2Q96IY4 423 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 UNKQ9C0B0 810 aaKnown RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 MYOZ2Q9NPC6 264 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 VPS45Q9NRW7 570 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 INTS7Q9NVH2 962 aaKnown RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 NUDT5Q9UKK9 219 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 CAPN6Q9Y6Q1 641 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 SAMD9LQ8IVG5 1584 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 TEX46H3BTG2 121 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 VAPBO95292 243 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 PGK1P00558 417 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 IFNA16P05015 189 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 TPH1P17752 444 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 NFKB1P19838 968 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 SERPINA4P29622 427 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 GCLCP48506 637 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 MAPK10P53779 464 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 HUNKP57058 714 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 BNIP2Q12982 314 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 HYIQ5T013 277 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 ULK3Q6PHR2 472 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 MCOLN2Q8IZK6 566 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 BPIFB6Q8NFQ5 453 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 SELENOMQ8WWX9 145 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 CRELD1Q96HD1 420 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 REXO5Q96IC2 774 aaKnown RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 PPP3R2Q96LZ3 170 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 PTPRHQ9HD43 1115 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 RASSF1Q9NS23 344 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 VPS4AQ9UN37 437 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 DCXO43602 365 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 CDC40O60508 579 aaKnown RBP eCLIP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 GNRH1P01148 92 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 WEE1P30291 646 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 INSCQ1MX18 579 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 Q4G0T1 1027 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 LYPLAL1Q5VWZ2 237 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 GALNT18Q6P9A2 607 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 RP9Q8TA86 221 aaKnown RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 STAG3L4Q8TBR4 150 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 TEX47Q8TBZ9 253 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 FBXO28Q9NVF7 368 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 ADAM28Q9UKQ2 775 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 L1RE1Q9UN81 338 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 TFR2Q9UP52 801 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 MFHAS1Q9Y4C4 1052 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 SNCAIPQ9Y6H5 919 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 QSOX1O00391 747 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 MAGEB3O15480 346 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 SCGNO76038 276 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 MLYCDO95822 493 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 LTA4HP09960 611 aaKnown RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 MYBL2P10244 700 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 CTSEP14091 401 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 EIF2S3P41091 472 aaKnown RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 HERVK_113P62684 666 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 IRF8Q02556 426 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 RFX4Q33E94 735 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 DOK6Q6PKX4 331 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 RASSF6Q6ZTQ3 369 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 SFRP1Q8N474 314 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 MAGEE2Q8TD90 523 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 ZHX1-C8orf76Q96EF9 292 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 APBA2Q99767 749 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 MRPL9Q9BYD2 267 aaKnown RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 ELOVL4Q9GZR5 314 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 NINJ2Q9NZG7 142 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 SERPINA1P01009 418 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 POLR2EP19388 210 aaKnown RBP9.1□□□□□ -0.95
BRCA1-205ENST00000461221 NR1H2P55055 460 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 HSF2Q03933 536 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 GIT2Q14161 759 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 GRB14Q14449 540 aa9.1□□□□□ -0.95
BRCA1-205ENST00000461221 HKDC1Q2TB90 917 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms