RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 OR52K2Q8NGK3 314 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 HSPH1Q92598 858 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 MIEF2Q96C03 454 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 HHIPQ96QV1 700 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 MAGEB5Q9BZ81 275 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 MAGEH1Q9H213 219 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 TMEM245Q9H330 911 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 ZDHHC4Q9NPG8 344 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 ZSCAN32Q9NX65 697 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 EBF1Q9UH73 591 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 SLC25A13Q9UJS0 675 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 ERVW-1Q9UQF0 538 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 A0A1W2PQF6 199 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 DAPK3O43293 454 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 SYNCRIPO60506 623 aaKnown RBP11.34□□□□□ -0.59
APTX-209ENST00000460940 FSBPO95073 299 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 PRKCHP24723 683 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 NNMTP40261 264 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 LIG3P49916 1009 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 YBEYP58557 167 aaPredicted RBP11.34□□□□□ -0.59
APTX-209ENST00000460940 DPYSQ14117 519 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 KRT81Q14533 505 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 PARP15Q460N3 678 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 WDR5BQ86VZ2 330 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 LONP2Q86WA8 852 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 RASSF3Q86WH2 238 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 UMODL1-AS1Q8N2C9 162 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 MRGPRX3Q96LB0 322 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 CD248Q9HCU0 757 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 SUN2Q9UH99 717 aa11.34□□□□□ -0.59
APTX-209ENST00000460940 A0A0D9SEW6 157 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 TCRBV21S2A2A0A5A6 115 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 ANKRD65E5RJM6 399 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 CHUKO15111 745 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 EPHX1P07099 455 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 GOT1P17174 413 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 WASP42768 502 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 GEMIN4P57678 1058 aaKnown RBP11.33□□□□□ -0.6
APTX-209ENST00000460940 KIF5AQ12840 1032 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 PDK2Q15119 407 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 IFI16Q16666 785 aaKnown RBP11.33□□□□□ -0.6
APTX-209ENST00000460940 WHAMMP3Q1A5X7 153 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 TXNRD3NBQ6F5E7 133 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 RETSATQ6NUM9 610 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 TSSK4Q6SA08 328 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 MAP7D3Q8IWC1 876 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 ZBTB44Q8NCP5 570 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 MYO19Q96H55 970 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 CSPG4P5Q96PW8 444 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 PSMB7Q99436 277 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 ZNF670Q9BS34 389 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 DESI2Q9BSY9 194 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 ACE2Q9BYF1 805 aaPredicted RBP11.33□□□□□ -0.6
APTX-209ENST00000460940 PCDH18Q9HCL0 1135 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 ATP13A1Q9HD20 1204 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 VPS51Q9UID3 782 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 HS3ST2Q9Y278 367 aa11.33□□□□□ -0.6
APTX-209ENST00000460940 MYO18AQ92614 2054 aaKnown RBP11.32□□□□□ -0.6
APTX-209ENST00000460940 EDDM13A0A1B0GTR0 161 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 RCCD1A6NED2 376 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 ZSCAN5CA6NGD5 496 aaPredicted RBP11.32□□□□□ -0.6
APTX-209ENST00000460940 A6NNZ2 444 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 ZNF487B1APH4 448 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 H0Y858 1186 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 AXIN1O15169 862 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 SPOPO43791 374 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 BUB1BO60566 1050 aaPredicted RBP11.32□□□□□ -0.6
APTX-209ENST00000460940 SYF2O95926 243 aaKnown RBP11.32□□□□□ -0.6
APTX-209ENST00000460940 CNR2P34972 360 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 CTSOP43234 321 aaPredicted RBP11.32□□□□□ -0.6
APTX-209ENST00000460940 NDST2P52849 883 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 CDH6P55285 790 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 TAS2R40P59535 323 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 CAMK2GQ13555 558 aaPredicted RBP11.32□□□□□ -0.6
APTX-209ENST00000460940 POLD3Q15054 466 aaPredicted RBP11.32□□□□□ -0.6
APTX-209ENST00000460940 HNRNPA1L2Q32P51 320 aaKnown RBP11.32□□□□□ -0.6
APTX-209ENST00000460940 TUBB8Q3ZCM7 444 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 ANO7Q6IWH7 933 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 VSIG1Q86XK7 387 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 RHOT1Q8IXI2 618 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 LZTR1Q8N653 840 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 OR7D4Q8NG98 312 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 TPCN2Q8NHX9 752 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 ARHGEF2Q92974 986 aaKnown RBP11.32□□□□□ -0.6
APTX-209ENST00000460940 SPON2Q9BUD6 331 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 TSGA10Q9BZW7 698 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 NDFIP2Q9NV92 336 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 POLR3BQ9NW08 1133 aaPredicted RBP11.32□□□□□ -0.6
APTX-209ENST00000460940 HPCAL4Q9UM19 191 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 ATG2BQ96BY7 2078 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 CKAP5Q14008 2032 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 TARSL2A2RTX5 802 aaKnown RBP11.32□□□□□ -0.6
APTX-209ENST00000460940 WASH3PC4AMC7 463 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 PSTPIP1O43586 416 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 ATP9BO43861 1147 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 C7P10643 843 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 ERCC2P18074 760 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 COMTP21964 271 aa11.32□□□□□ -0.6
APTX-209ENST00000460940 SERPINB6P35237 376 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms