RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 PTPN13Q12923 2485 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 GOLGA6L7A0A1B0GV03 622 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 A0A1W2PQC6 194 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 TYW5A2RUC4 315 aaKnown RBP17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 SLC7A4O43246 635 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 MSI1O43347 362 aaKnown RBP17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 RNGTTO60942 597 aaKnown RBP17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 KRT5P13647 590 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 UCHL3P15374 230 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 MZF1P28698 734 aaPredicted RBP17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 SLC6A4P31645 630 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 DRD3P35462 400 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 USP8P40818 1118 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 POLR2FP61218 127 aaKnown RBP17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 ELAVL3Q14576 367 aaKnown RBP17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 ARL13BQ3SXY8 428 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 SETMARQ53H47 684 aaPredicted RBP17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 FAM133BQ5BKY9 247 aaKnown RBP17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 PITRM1Q5JRX3 1037 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 C6orf132Q5T0Z8 1188 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 NUGGCQ68CJ6 796 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 ARHGAP17Q68EM7 881 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 TMEM270Q6UE05 265 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 ZNF574Q6ZN55 896 aaPredicted RBP17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 ATG14Q6ZNE5 492 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 CCDC117Q8IWD4 279 aaPredicted RBP17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 EXD3Q8N9H8 876 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 PTPRN2Q92932 1015 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 APOLD1Q96LR9 279 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 OSBPL2Q9H1P3 480 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 GANQ9H2C0 597 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 NLRC4Q9NPP4 1024 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 NLGN3Q9NZ94 848 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 AJAP1Q9UKB5 411 aaPredicted RBP17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 PCDHGA8Q9Y5G5 932 aa17.1■□□□□ 0.33
TMEM50B-205ENST00000459909 PLRG1O43660 514 aaKnown RBP17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 ACSL4O60488 711 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 MOCS3O95396 460 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 IGLV3-27P01718 113 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 GIMD1P0DJR0 217 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 CTSOP43234 321 aaPredicted RBP17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 ECT2LQ008S8 904 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 CDH18Q13634 790 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 RNF219Q5W0B1 726 aaPredicted RBP17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 DPY19L2P1Q6NXN4 242 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 SARM1Q6SZW1 724 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 CARNMT1Q8N4J0 409 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 SLC4A11Q8NBS3 891 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 MAPK15Q8TD08 544 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 AZIN2Q96A70 460 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 LRRC4Q9HBW1 653 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 SLCO3A1Q9UIG8 710 aa17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 UBR5O95071 2799 aaPredicted RBP17.09■□□□□ 0.33
TMEM50B-205ENST00000459909 PIEZO2Q9H5I5 2752 aa17.08■□□□□ 0.33
TMEM50B-205ENST00000459909 YJEFN3A6XGL0 299 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 CDRT15L2A8MXV6 281 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 E7ENQ6 273 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 XPO1O14980 1071 aaKnown RBP17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 EPHB6O15197 1021 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 RTN2O75298 545 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 PIAS2O75928 621 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 THEGLP0DJG4 465 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 RAD23BP54727 409 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 DRAP1Q14919 205 aaPredicted RBP17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 UBR7Q8N806 425 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 TMEM145Q8NBT3 493 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 PRICKLE1Q96MT3 831 aaPredicted RBP17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 SPAG5Q96R06 1193 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 CCNL2Q96S94 520 aaPredicted RBP17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 DDX50Q9BQ39 737 aaKnown RBP17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 DUSP23Q9BVJ7 150 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 STARD5Q9NSY2 213 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 CA5BQ9Y2D0 317 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 CEP83Q9Y592 693 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 COL12A1Q99715 3063 aa17.08■□□□□ 0.32
TMEM50B-205ENST00000459909 LY6G6EA0A0G2JKS1 128 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 A0A1W2PNU3 283 aaPredicted RBP17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 NEMP2A6NFY4 417 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 TULP2O00295 520 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 CD19P15391 556 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 NNMTP40261 264 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 MLLT3P42568 568 aaPredicted RBP17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 RPS24P62847 133 aaKnown RBP17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 ADIGQ0VDE8 80 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 CLN3Q13286 438 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 POM121L1PQ3SYA9 428 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 FSCBQ5H9T9 825 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 MSANTD2Q6P1R3 559 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 MMS22LQ6ZRQ5 1243 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 ARL14Q8N4G2 192 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 IFI44Q8TCB0 444 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 SHC3Q92529 594 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 ATXN7L3BQ96GX2 97 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 PRR11Q96HE9 360 aaPredicted RBP17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 DAAM1Q9Y4D1 1078 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 U3KQA8 63 aa17.07■□□□□ 0.32
TMEM50B-205ENST00000459909 RNF225M0QZC1 329 aaPredicted RBP17.06■□□□□ 0.32
TMEM50B-205ENST00000459909 SCAMP1O15126 338 aa17.06■□□□□ 0.32
TMEM50B-205ENST00000459909 SUV39H1O43463 412 aa17.06■□□□□ 0.32
TMEM50B-205ENST00000459909 LUC7L3O95232 432 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms