RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 C2orf16Q68DN1 1984 aa24.9■■□□□ 1.58
U2AF1-204ENST00000459639 E2F8A0AVK6 867 aa24.9■■□□□ 1.58
U2AF1-204ENST00000459639 SCAMP3O14828 347 aaKnown RBP24.9■■□□□ 1.58
U2AF1-204ENST00000459639 TBL1XO60907 577 aa24.9■■□□□ 1.58
U2AF1-204ENST00000459639 AVILO75366 819 aa24.9■■□□□ 1.58
U2AF1-204ENST00000459639 KCNC3Q14003 757 aa24.9■■□□□ 1.58
U2AF1-204ENST00000459639 MARC1Q5VT66 337 aa24.9■■□□□ 1.58
U2AF1-204ENST00000459639 BBS7Q8IWZ6 715 aa24.9■■□□□ 1.58
U2AF1-204ENST00000459639 SMG7Q92540 1137 aaKnown RBP24.9■■□□□ 1.58
U2AF1-204ENST00000459639 TMA16Q96EY4 203 aaKnown RBP24.9■■□□□ 1.58
U2AF1-204ENST00000459639 MLPHQ9BV36 600 aaPredicted RBP24.9■■□□□ 1.58
U2AF1-204ENST00000459639 PIDD1Q9HB75 910 aa24.9■■□□□ 1.58
U2AF1-204ENST00000459639 PDFQ9HBH1 243 aa24.9■■□□□ 1.58
U2AF1-204ENST00000459639 CHMP2BQ9UQN3 213 aa24.9■■□□□ 1.58
U2AF1-204ENST00000459639 HOXD9P28356 352 aaPredicted RBP24.89■■□□□ 1.58
U2AF1-204ENST00000459639 PHBP35232 272 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 MTM1Q13496 603 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 STAT4Q14765 748 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 TTMPQ5BVD1 217 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 CXorf57Q6NSI4 855 aaKnown RBP24.89■■□□□ 1.58
U2AF1-204ENST00000459639 TDHQ8IZJ6 230 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 AGGF1Q8N302 714 aaeCLIP24.89■■□□□ 1.58
U2AF1-204ENST00000459639 OR52K2Q8NGK3 314 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 PPP2R3CQ969Q6 453 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 ARL8AQ96BM9 186 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 PABPC5Q96DU9 382 aaKnown RBP24.89■■□□□ 1.58
U2AF1-204ENST00000459639 MRPL38Q96DV4 380 aaKnown RBP24.89■■□□□ 1.58
U2AF1-204ENST00000459639 CCDC77Q9BR77 488 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 SMG9Q9H0W8 520 aaKnown RBP24.89■■□□□ 1.58
U2AF1-204ENST00000459639 LRRC40Q9H9A6 602 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 VPS37BQ9H9H4 285 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 DZANK1Q9NVP4 752 aa24.89■■□□□ 1.58
U2AF1-204ENST00000459639 AAR2Q9Y312 384 aaKnown RBP24.89■■□□□ 1.58
U2AF1-204ENST00000459639 A0A0D9SEW6 157 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 TCEA3O75764 348 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 ANXA9O76027 345 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 LUC7L3O95232 432 aaKnown RBP24.88■■□□□ 1.57
U2AF1-204ENST00000459639 IVLP07476 585 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 GRIA1P42261 906 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 TMCO4Q5TGY1 634 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 OTOP3Q7RTS5 596 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 PALM2Q8IXS6 379 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 TDRD5Q8NAT2 981 aaKnown RBP24.88■■□□□ 1.57
U2AF1-204ENST00000459639 USP13Q92995 863 aaPredicted RBP24.88■■□□□ 1.57
U2AF1-204ENST00000459639 TDP1Q9NUW8 608 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 SPAG6O75602 509 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 TCF3P15923 654 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 MMP13P45452 471 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 GPX6P59796 221 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 SLC10A7Q0GE19 358 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 MPPE1Q53F39 396 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 MPP7Q5T2T1 576 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 IL31Q6EBC2 164 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 TTC16Q8NEE8 873 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 VN1R2Q8NFZ6 395 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 OR7D4Q8NG98 312 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 OXNAD1Q96HP4 312 aaPredicted RBP24.88■■□□□ 1.57
U2AF1-204ENST00000459639 SIGLEC10Q96LC7 697 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 CCL26Q9Y258 94 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 MRPS23Q9Y3D9 190 aaKnown RBP24.88■■□□□ 1.57
U2AF1-204ENST00000459639 TTLL3Q9Y4R7 772 aa24.88■■□□□ 1.57
U2AF1-204ENST00000459639 H0Y626 953 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 RASGRF2O14827 1237 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 KDELR3O43731 214 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 CPP00450 1065 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 CEBPBP17676 345 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 GEMP55040 296 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 OXCT1P55809 520 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 LBRQ14739 615 aaKnown RBP24.87■■□□□ 1.57
U2AF1-204ENST00000459639 AGBL2Q5U5Z8 902 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 IGDCC3Q8IVU1 814 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 TNS4Q8IZW8 715 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 CARNMT1Q8N4J0 409 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 TIFAQ96CG3 184 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 ATP6V1G3Q96LB4 118 aa24.87■■□□□ 1.57
U2AF1-204ENST00000459639 ACE2Q9BYF1 805 aaPredicted RBP24.87■■□□□ 1.57
U2AF1-204ENST00000459639 HMGB1P1B2RPK0 211 aaPredicted RBP24.86■■□□□ 1.57
U2AF1-204ENST00000459639 USP4Q13107 963 aa24.86■■□□□ 1.57
U2AF1-204ENST00000459639 NAPEPLDQ6IQ20 393 aa24.86■■□□□ 1.57
U2AF1-204ENST00000459639 LINC00523Q86TU6 105 aa24.86■■□□□ 1.57
U2AF1-204ENST00000459639 EPS8L3Q8TE67 593 aaKnown RBP24.86■■□□□ 1.57
U2AF1-204ENST00000459639 SLC25A51Q9H1U9 297 aa24.86■■□□□ 1.57
U2AF1-204ENST00000459639 ATP13A1Q9HD20 1204 aa24.86■■□□□ 1.57
U2AF1-204ENST00000459639 NT5MQ9NPB1 228 aa24.86■■□□□ 1.57
U2AF1-204ENST00000459639 CASS4Q9NQ75 786 aa24.86■■□□□ 1.57
U2AF1-204ENST00000459639 MIA3Q5JRA6 1907 aa24.86■■□□□ 1.57
U2AF1-204ENST00000459639 AP3B1O00203 1094 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 GSTA2P09210 222 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 SSTR1P30872 391 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 SPARCL1Q14515 664 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 RNF219Q5W0B1 726 aaPredicted RBP24.85■■□□□ 1.57
U2AF1-204ENST00000459639 CAPN12Q6ZSI9 719 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 C3orf62Q6ZUJ4 267 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 C12orf76Q8N812 135 aaPredicted RBP24.85■■□□□ 1.57
U2AF1-204ENST00000459639 DDI1Q8WTU0 396 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 PGM2Q96G03 612 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 EBNA1BP2Q99848 306 aaKnown RBP24.85■■□□□ 1.57
U2AF1-204ENST00000459639 SPON2Q9BUD6 331 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 MUC3BQ9H195 1237 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 HAUS2Q9NVX0 235 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms