RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CSKP41240 450 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 CTSOP43234 321 aaPredicted RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 SLC11A2P49281 568 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 HARS2P49590 506 aaKnown RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 KPNA1P52294 538 aaPredicted RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 ZNF135P52742 658 aaPredicted RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 GPX6P59796 221 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 CRADDP78560 199 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 ARF5P84085 180 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 DSC2Q02487 901 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 GNA12Q03113 381 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 ADAM15Q13444 863 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 SERINC3Q13530 473 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 SEMA5AQ13591 1074 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 EFTUD2Q15029 972 aaKnown RBP eCLIP8.92□□□□□ -0.98
RIF1-208ENST00000457745 SMAD1Q15797 465 aaKnown RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 FYB2Q5VWT5 728 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 RNF219Q5W0B1 726 aaPredicted RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 KCTD11Q693B1 232 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 HEATR6Q6AI08 1181 aaKnown RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 LINGO4Q6UY18 593 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 TPGS1Q6ZTW0 290 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 GET4Q7L5D6 327 aaPredicted RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 GPR149Q86SP6 731 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 TADA2BQ86TJ2 420 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 PRPF39Q86UA1 669 aaKnown RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 C12orf40Q86WS4 652 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 RNF135Q8IUD6 432 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 KLHDC8BQ8IXV7 354 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 PPIL6Q8IXY8 311 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 IQCKQ8N0W5 287 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 ELMOD1Q8N336 334 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 ZCCHC9Q8N567 271 aaKnown RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 ATPAF2Q8N5M1 289 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 EFHBQ8N7U6 833 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 EIF1ADQ8N9N8 165 aaKnown RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 TDRD5Q8NAT2 981 aaKnown RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 ARL8AQ96BM9 186 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 FAM161BQ96MY7 647 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 RPP25Q9BUL9 199 aaKnown RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 NSUN3Q9H649 340 aaKnown RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 SFXN1Q9H9B4 322 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 SAYSD1Q9NPB0 183 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 PAK5Q9P286 719 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 MRPS23Q9Y3D9 190 aaKnown RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 MTCH2Q9Y6C9 303 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 COL4A2P08572 1712 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 E7ESA3 106 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 K7ERQ8 282 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 PPP1R12AO14974 1030 aaPredicted RBP8.91□□□□□ -0.98
RIF1-208ENST00000457745 CACNG3O60359 315 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 PRAMEF11O60813 436 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 XYLBO75191 536 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 LUC7L3O95232 432 aaKnown RBP8.91□□□□□ -0.98
RIF1-208ENST00000457745 SYF2O95926 243 aaKnown RBP8.91□□□□□ -0.98
RIF1-208ENST00000457745 MT-CYBP00156 380 aaPredicted RBP8.91□□□□□ -0.98
RIF1-208ENST00000457745 MT-CO1P00395 513 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 OR1E1P30953 314 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 STIP1P31948 543 aaKnown RBP8.91□□□□□ -0.98
RIF1-208ENST00000457745 MAGEA3P43357 314 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 CHRNA4P43681 627 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 MAPKAPK2P49137 400 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 NDST2P52849 883 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 CDH4P55283 916 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 FAM193AP78312 1265 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 LMNB2Q03252 620 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 LMAN2Q12907 356 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 PTPRRQ15256 657 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 CYTH1Q15438 398 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 KYNUQ16719 465 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 TEX44Q53QW1 395 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 KDELC1Q6UW63 502 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 LRRC31Q6UY01 552 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 TMEM184AQ6ZMB5 413 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 CAPN12Q6ZSI9 719 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 NUDT18Q6ZVK8 323 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 CHST9Q7L1S5 443 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 PID1Q7Z2X4 250 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 UNC5BQ8IZJ1 945 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 CARNMT1Q8N4J0 409 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 ARRDC2Q8TBH0 407 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 FGF13Q92913 245 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 CHFRQ96EP1 664 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 TEKT5Q96M29 485 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 SERPINB12Q96P63 405 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 GCNAQ96QF7 691 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 ACE2Q9BYF1 805 aaPredicted RBP8.91□□□□□ -0.98
RIF1-208ENST00000457745 GBA3Q9H227 469 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 PRDM16Q9HAZ2 1276 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 PIDD1Q9HB75 910 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 NT5MQ9NPB1 228 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 TDP1Q9NUW8 608 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 KLHL8Q9P2G9 620 aaPredicted RBP8.91□□□□□ -0.98
RIF1-208ENST00000457745 IGSF9Q9P2J2 1179 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 SLC17A6Q9P2U8 582 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 SLC12A6Q9UHW9 1150 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 SHOC2Q9UQ13 582 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 PLAAQ9Y263 795 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 TBC1D30Q9Y2I9 924 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms